Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00470 and PS417_00475 are separated by 98 nucleotides PS417_00475 and PS417_00480 are separated by 103 nucleotides PS417_00480 and PS417_00485 overlap by 4 nucleotides
PS417_00470: PS417_00470 - glutamate:protein symporter, at 92,676 to 94,007
_00470
PS417_00475: PS417_00475 - membrane protein, at 94,106 to 95,335
_00475
PS417_00480: PS417_00480 - hypothetical protein, at 95,439 to 96,050
_00480
PS417_00485: PS417_00485 - ABC transporter permease, at 96,047 to 96,985
_00485
Position (kb) 94
95
96 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 93.122 kb on + strand, within PS417_00470 at 93.289 kb on - strand, within PS417_00470 at 93.495 kb on + strand, within PS417_00470 at 93.628 kb on - strand, within PS417_00470 at 93.628 kb on - strand, within PS417_00470 at 93.663 kb on + strand, within PS417_00470 at 93.663 kb on + strand, within PS417_00470 at 93.664 kb on - strand, within PS417_00470 at 93.664 kb on - strand, within PS417_00470 at 93.731 kb on + strand, within PS417_00470 at 93.732 kb on - strand, within PS417_00470 at 93.915 kb on + strand at 93.915 kb on + strand at 93.915 kb on + strand at 93.915 kb on + strand at 93.915 kb on + strand at 93.916 kb on - strand at 93.916 kb on - strand at 93.916 kb on - strand at 94.072 kb on + strand at 94.725 kb on - strand, within PS417_00475 at 94.725 kb on - strand, within PS417_00475 at 94.886 kb on + strand, within PS417_00475 at 94.909 kb on + strand, within PS417_00475 at 95.207 kb on + strand, within PS417_00475 at 95.207 kb on + strand, within PS417_00475 at 95.207 kb on + strand, within PS417_00475 at 95.208 kb on - strand, within PS417_00475 at 95.208 kb on - strand, within PS417_00475 at 95.208 kb on - strand, within PS417_00475 at 95.223 kb on - strand at 95.318 kb on + strand at 95.319 kb on - strand at 95.374 kb on + strand at 95.375 kb on - strand at 95.375 kb on - strand at 95.698 kb on + strand, within PS417_00480 at 95.699 kb on - strand, within PS417_00480 at 95.717 kb on + strand, within PS417_00480 at 95.768 kb on + strand, within PS417_00480 at 95.821 kb on + strand, within PS417_00480 at 96.018 kb on + strand at 96.019 kb on - strand at 96.030 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 93,122 + PS417_00470 0.33 +0.6 93,289 - PS417_00470 0.46 +0.2 93,495 + PS417_00470 0.61 +0.2 93,628 - PS417_00470 0.71 +0.5 93,628 - PS417_00470 0.71 +1.3 93,663 + PS417_00470 0.74 +0.3 93,663 + PS417_00470 0.74 +2.6 93,664 - PS417_00470 0.74 -0.1 93,664 - PS417_00470 0.74 +0.1 93,731 + PS417_00470 0.79 -0.4 93,732 - PS417_00470 0.79 +0.0 93,915 + +0.6 93,915 + -0.4 93,915 + +1.3 93,915 + -0.5 93,915 + +1.0 93,916 - +0.5 93,916 - +0.4 93,916 - -0.7 94,072 + +0.1 94,725 - PS417_00475 0.50 -3.0 94,725 - PS417_00475 0.50 -1.0 94,886 + PS417_00475 0.63 -3.2 94,909 + PS417_00475 0.65 -2.6 95,207 + PS417_00475 0.90 -2.1 95,207 + PS417_00475 0.90 -2.0 95,207 + PS417_00475 0.90 -4.4 95,208 - PS417_00475 0.90 -1.8 95,208 - PS417_00475 0.90 -1.2 95,208 - PS417_00475 0.90 -1.2 95,223 - -2.2 95,318 + -2.9 95,319 - -1.8 95,374 + -0.1 95,375 - -0.1 95,375 - +0.0 95,698 + PS417_00480 0.42 -0.2 95,699 - PS417_00480 0.42 -0.5 95,717 + PS417_00480 0.45 +1.3 95,768 + PS417_00480 0.54 -0.5 95,821 + PS417_00480 0.62 +0.2 96,018 + -1.8 96,019 - +0.2 96,030 + +2.2
Or see this region's nucleotide sequence