Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00360 and PS417_00365 are separated by 265 nucleotides PS417_00365 and PS417_00370 are separated by 98 nucleotides PS417_00370 and PS417_00375 are separated by 37 nucleotides
PS417_00360: PS417_00360 - methionine ABC transporter ATP-binding protein, at 69,194 to 70,201
_00360
PS417_00365: PS417_00365 - hydroperoxidase, at 70,467 to 72,608
_00365
PS417_00370: PS417_00370 - hypothetical protein, at 72,707 to 73,426
_00370
PS417_00375: PS417_00375 - membrane protein, at 73,464 to 74,252
_00375
Position (kb)
70
71
72
73 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 70.178 kb on - strand at 70.204 kb on - strand at 70.204 kb on - strand at 70.260 kb on + strand at 70.372 kb on - strand at 70.372 kb on - strand at 70.375 kb on + strand at 70.375 kb on + strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.376 kb on - strand at 70.452 kb on - strand at 70.452 kb on - strand at 70.768 kb on - strand, within PS417_00365 at 70.780 kb on - strand, within PS417_00365 at 70.832 kb on + strand, within PS417_00365 at 70.890 kb on - strand, within PS417_00365 at 70.920 kb on - strand, within PS417_00365 at 71.184 kb on - strand, within PS417_00365 at 71.184 kb on - strand, within PS417_00365 at 71.308 kb on - strand, within PS417_00365 at 71.350 kb on - strand, within PS417_00365 at 71.378 kb on + strand, within PS417_00365 at 71.602 kb on - strand, within PS417_00365 at 71.681 kb on + strand, within PS417_00365 at 71.736 kb on + strand, within PS417_00365 at 71.736 kb on + strand, within PS417_00365 at 71.737 kb on - strand at 71.937 kb on + strand, within PS417_00365 at 71.937 kb on + strand, within PS417_00365 at 71.938 kb on - strand, within PS417_00365 at 71.939 kb on + strand, within PS417_00365 at 71.940 kb on - strand, within PS417_00365 at 71.940 kb on - strand, within PS417_00365 at 72.320 kb on + strand, within PS417_00365 at 72.423 kb on + strand at 72.424 kb on - strand at 72.424 kb on - strand at 72.444 kb on - strand at 72.584 kb on + strand at 72.585 kb on - strand at 72.591 kb on - strand at 73.183 kb on - strand, within PS417_00370 at 73.440 kb on + strand at 73.465 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 70,178 - -0.4 70,204 - +0.5 70,204 - -0.1 70,260 + +1.6 70,372 - -0.7 70,372 - -0.5 70,375 + +0.2 70,375 + -0.3 70,376 - -0.4 70,376 - +0.0 70,376 - +0.6 70,376 - -0.6 70,376 - -0.9 70,376 - +0.5 70,376 - -0.2 70,376 - -0.1 70,452 - -0.1 70,452 - -0.1 70,768 - PS417_00365 0.14 +0.3 70,780 - PS417_00365 0.15 +0.8 70,832 + PS417_00365 0.17 -1.2 70,890 - PS417_00365 0.20 -1.0 70,920 - PS417_00365 0.21 +0.2 71,184 - PS417_00365 0.33 -0.4 71,184 - PS417_00365 0.33 +0.3 71,308 - PS417_00365 0.39 -0.2 71,350 - PS417_00365 0.41 +0.4 71,378 + PS417_00365 0.43 +0.7 71,602 - PS417_00365 0.53 -0.4 71,681 + PS417_00365 0.57 -0.1 71,736 + PS417_00365 0.59 +0.7 71,736 + PS417_00365 0.59 -1.1 71,737 - +1.6 71,937 + PS417_00365 0.69 -0.2 71,937 + PS417_00365 0.69 -0.2 71,938 - PS417_00365 0.69 -3.0 71,939 + PS417_00365 0.69 +0.2 71,940 - PS417_00365 0.69 -0.5 71,940 - PS417_00365 0.69 +0.0 72,320 + PS417_00365 0.87 +0.2 72,423 + -1.4 72,424 - -0.4 72,424 - -1.3 72,444 - -0.9 72,584 + -0.1 72,585 - +0.6 72,591 - -0.3 73,183 - PS417_00370 0.66 -1.2 73,440 + -0.6 73,465 + +0.4
Or see this region's nucleotide sequence