Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03265 and PS417_03270 overlap by 14 nucleotides PS417_03270 and PS417_03275 overlap by 8 nucleotides PS417_03275 and PS417_03280 are separated by 61 nucleotides
PS417_03265: PS417_03265 - paraquat-inducible protein A, at 747,756 to 748,415
_03265
PS417_03270: PS417_03270 - paraquat-inducible protein A, at 748,402 to 749,025
_03270
PS417_03275: PS417_03275 - mammalian cell entry protein, at 749,018 to 751,321
_03275
PS417_03280: PS417_03280 - chromosome partitioning protein ParA, at 751,383 to 754,223
_03280
Position (kb)
749
750
751
752 Strain fitness (log2 ratio)
-1
0
1
2 at 748.087 kb on + strand, within PS417_03265 at 748.176 kb on + strand, within PS417_03265 at 748.177 kb on - strand, within PS417_03265 at 748.200 kb on + strand, within PS417_03265 at 748.201 kb on - strand, within PS417_03265 at 748.201 kb on - strand, within PS417_03265 at 748.324 kb on + strand, within PS417_03265 at 748.711 kb on - strand, within PS417_03270 at 748.711 kb on - strand, within PS417_03270 at 748.728 kb on + strand, within PS417_03270 at 748.728 kb on + strand, within PS417_03270 at 748.729 kb on - strand, within PS417_03270 at 748.742 kb on + strand, within PS417_03270 at 748.743 kb on - strand, within PS417_03270 at 748.808 kb on - strand, within PS417_03270 at 748.996 kb on - strand at 749.038 kb on + strand at 749.213 kb on - strand at 749.399 kb on + strand, within PS417_03275 at 749.399 kb on + strand, within PS417_03275 at 749.400 kb on - strand, within PS417_03275 at 749.400 kb on - strand, within PS417_03275 at 749.400 kb on - strand, within PS417_03275 at 749.400 kb on - strand, within PS417_03275 at 749.400 kb on - strand, within PS417_03275 at 749.549 kb on + strand, within PS417_03275 at 749.549 kb on + strand, within PS417_03275 at 749.550 kb on - strand, within PS417_03275 at 749.582 kb on + strand, within PS417_03275 at 749.582 kb on + strand, within PS417_03275 at 749.583 kb on - strand, within PS417_03275 at 749.583 kb on - strand, within PS417_03275 at 749.583 kb on - strand, within PS417_03275 at 749.624 kb on + strand, within PS417_03275 at 749.624 kb on + strand, within PS417_03275 at 749.624 kb on + strand, within PS417_03275 at 749.625 kb on - strand, within PS417_03275 at 749.716 kb on - strand, within PS417_03275 at 749.921 kb on + strand, within PS417_03275 at 749.921 kb on + strand, within PS417_03275 at 749.922 kb on - strand, within PS417_03275 at 749.922 kb on - strand, within PS417_03275 at 750.021 kb on - strand, within PS417_03275 at 750.021 kb on - strand, within PS417_03275 at 750.021 kb on - strand, within PS417_03275 at 750.021 kb on - strand, within PS417_03275 at 750.110 kb on + strand, within PS417_03275 at 750.110 kb on + strand, within PS417_03275 at 750.110 kb on + strand, within PS417_03275 at 750.267 kb on - strand, within PS417_03275 at 750.299 kb on + strand, within PS417_03275 at 750.630 kb on + strand, within PS417_03275 at 750.656 kb on - strand, within PS417_03275 at 750.713 kb on - strand, within PS417_03275 at 750.796 kb on + strand, within PS417_03275 at 750.824 kb on + strand, within PS417_03275 at 750.825 kb on - strand, within PS417_03275 at 750.980 kb on + strand, within PS417_03275 at 751.070 kb on + strand, within PS417_03275 at 751.070 kb on + strand, within PS417_03275 at 751.071 kb on - strand, within PS417_03275 at 751.457 kb on - strand at 751.457 kb on - strand at 751.480 kb on + strand at 751.480 kb on + strand at 751.480 kb on + strand at 751.481 kb on - strand at 751.639 kb on + strand at 751.643 kb on - strand at 751.643 kb on - strand at 751.696 kb on + strand, within PS417_03280 at 751.696 kb on + strand, within PS417_03280 at 751.696 kb on + strand, within PS417_03280 at 751.697 kb on - strand, within PS417_03280 at 751.697 kb on - strand, within PS417_03280 at 751.697 kb on - strand, within PS417_03280 at 751.865 kb on - strand, within PS417_03280 at 751.976 kb on + strand, within PS417_03280 at 751.977 kb on - strand, within PS417_03280 at 752.106 kb on - strand, within PS417_03280 at 752.189 kb on - strand, within PS417_03280 at 752.189 kb on - strand, within PS417_03280 at 752.262 kb on + strand, within PS417_03280 at 752.272 kb on + strand at 752.272 kb on + strand, within PS417_03280 at 752.272 kb on + strand, within PS417_03280 at 752.273 kb on - strand, within PS417_03280 at 752.273 kb on - strand, within PS417_03280
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 748,087 + PS417_03265 0.50 +0.4 748,176 + PS417_03265 0.64 +0.2 748,177 - PS417_03265 0.64 -0.2 748,200 + PS417_03265 0.67 +0.6 748,201 - PS417_03265 0.67 -0.4 748,201 - PS417_03265 0.67 -1.6 748,324 + PS417_03265 0.86 +0.2 748,711 - PS417_03270 0.50 -0.8 748,711 - PS417_03270 0.50 -0.8 748,728 + PS417_03270 0.52 +0.3 748,728 + PS417_03270 0.52 -0.1 748,729 - PS417_03270 0.52 -0.2 748,742 + PS417_03270 0.54 -1.2 748,743 - PS417_03270 0.55 -0.5 748,808 - PS417_03270 0.65 +0.4 748,996 - -0.1 749,038 + -1.2 749,213 - +1.1 749,399 + PS417_03275 0.17 -0.2 749,399 + PS417_03275 0.17 -0.5 749,400 - PS417_03275 0.17 +0.0 749,400 - PS417_03275 0.17 +0.5 749,400 - PS417_03275 0.17 -0.4 749,400 - PS417_03275 0.17 +0.0 749,400 - PS417_03275 0.17 -0.2 749,549 + PS417_03275 0.23 -0.0 749,549 + PS417_03275 0.23 -0.0 749,550 - PS417_03275 0.23 +0.7 749,582 + PS417_03275 0.24 +0.8 749,582 + PS417_03275 0.24 -1.1 749,583 - PS417_03275 0.25 -0.0 749,583 - PS417_03275 0.25 -0.3 749,583 - PS417_03275 0.25 +0.5 749,624 + PS417_03275 0.26 -0.2 749,624 + PS417_03275 0.26 -0.5 749,624 + PS417_03275 0.26 -0.2 749,625 - PS417_03275 0.26 +0.4 749,716 - PS417_03275 0.30 -0.9 749,921 + PS417_03275 0.39 -0.3 749,921 + PS417_03275 0.39 +1.8 749,922 - PS417_03275 0.39 +0.3 749,922 - PS417_03275 0.39 -0.5 750,021 - PS417_03275 0.44 -0.3 750,021 - PS417_03275 0.44 -0.1 750,021 - PS417_03275 0.44 -0.1 750,021 - PS417_03275 0.44 +0.5 750,110 + PS417_03275 0.47 -0.7 750,110 + PS417_03275 0.47 -0.3 750,110 + PS417_03275 0.47 -1.5 750,267 - PS417_03275 0.54 -0.6 750,299 + PS417_03275 0.56 +0.1 750,630 + PS417_03275 0.70 +1.8 750,656 - PS417_03275 0.71 -0.9 750,713 - PS417_03275 0.74 +0.4 750,796 + PS417_03275 0.77 -0.5 750,824 + PS417_03275 0.78 -0.6 750,825 - PS417_03275 0.78 +0.1 750,980 + PS417_03275 0.85 +0.1 751,070 + PS417_03275 0.89 -0.8 751,070 + PS417_03275 0.89 +1.2 751,071 - PS417_03275 0.89 -1.6 751,457 - -1.2 751,457 - +0.6 751,480 + +0.8 751,480 + -0.2 751,480 + +1.1 751,481 - -0.8 751,639 + -0.4 751,643 - -0.6 751,643 - -0.6 751,696 + PS417_03280 0.11 -0.6 751,696 + PS417_03280 0.11 -0.3 751,696 + PS417_03280 0.11 -0.5 751,697 - PS417_03280 0.11 +0.2 751,697 - PS417_03280 0.11 -1.1 751,697 - PS417_03280 0.11 -0.3 751,865 - PS417_03280 0.17 -1.1 751,976 + PS417_03280 0.21 -1.0 751,977 - PS417_03280 0.21 +0.1 752,106 - PS417_03280 0.25 +0.0 752,189 - PS417_03280 0.28 +0.1 752,189 - PS417_03280 0.28 -0.9 752,262 + PS417_03280 0.31 +0.4 752,272 + +0.4 752,272 + PS417_03280 0.31 -1.4 752,272 + PS417_03280 0.31 -0.7 752,273 - PS417_03280 0.31 -1.0 752,273 - PS417_03280 0.31 -0.4
Or see this region's nucleotide sequence