Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27845 and PS417_27850 are separated by 189 nucleotides PS417_27850 and PS417_27855 are separated by 6 nucleotides PS417_27855 and PS417_27860 overlap by 4 nucleotides
PS417_27845: PS417_27845 - oxidoreductase, at 6,002,518 to 6,003,369
_27845
PS417_27850: PS417_27850 - biopolymer transporter ExbB, at 6,003,559 to 6,004,539
_27850
PS417_27855: PS417_27855 - biopolymer transporter ExbD, at 6,004,546 to 6,004,971
_27855
PS417_27860: PS417_27860 - energy transducer TonB, at 6,004,968 to 6,005,717
_27860
Position (kb)
6003
6004
6005 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6002.589 kb on + strand at 6002.724 kb on - strand, within PS417_27845 at 6002.724 kb on - strand, within PS417_27845 at 6002.732 kb on + strand, within PS417_27845 at 6002.733 kb on - strand, within PS417_27845 at 6002.752 kb on + strand, within PS417_27845 at 6002.813 kb on + strand, within PS417_27845 at 6002.814 kb on - strand, within PS417_27845 at 6002.815 kb on + strand, within PS417_27845 at 6002.815 kb on + strand, within PS417_27845 at 6002.815 kb on + strand, within PS417_27845 at 6002.815 kb on + strand, within PS417_27845 at 6002.816 kb on - strand, within PS417_27845 at 6002.816 kb on - strand, within PS417_27845 at 6002.816 kb on - strand, within PS417_27845 at 6002.816 kb on - strand, within PS417_27845 at 6002.885 kb on + strand, within PS417_27845 at 6002.886 kb on - strand, within PS417_27845 at 6002.886 kb on - strand, within PS417_27845 at 6003.044 kb on - strand, within PS417_27845 at 6003.112 kb on + strand, within PS417_27845 at 6003.112 kb on + strand, within PS417_27845 at 6003.113 kb on - strand, within PS417_27845 at 6003.113 kb on - strand, within PS417_27845 at 6003.116 kb on + strand, within PS417_27845 at 6003.325 kb on - strand at 6003.328 kb on + strand at 6003.328 kb on + strand at 6003.328 kb on + strand at 6003.328 kb on + strand at 6003.328 kb on + strand at 6003.328 kb on + strand at 6003.329 kb on - strand at 6003.329 kb on - strand at 6003.329 kb on - strand at 6003.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 6,002,589 + -0.2 6,002,724 - PS417_27845 0.24 +0.1 6,002,724 - PS417_27845 0.24 -0.3 6,002,732 + PS417_27845 0.25 -0.1 6,002,733 - PS417_27845 0.25 -0.7 6,002,752 + PS417_27845 0.27 +1.1 6,002,813 + PS417_27845 0.35 +1.0 6,002,814 - PS417_27845 0.35 -1.2 6,002,815 + PS417_27845 0.35 -0.4 6,002,815 + PS417_27845 0.35 -3.3 6,002,815 + PS417_27845 0.35 +0.5 6,002,815 + PS417_27845 0.35 -1.1 6,002,816 - PS417_27845 0.35 +0.6 6,002,816 - PS417_27845 0.35 +0.6 6,002,816 - PS417_27845 0.35 -0.4 6,002,816 - PS417_27845 0.35 -0.2 6,002,885 + PS417_27845 0.43 +0.3 6,002,886 - PS417_27845 0.43 +0.1 6,002,886 - PS417_27845 0.43 -0.2 6,003,044 - PS417_27845 0.62 +0.4 6,003,112 + PS417_27845 0.70 +0.2 6,003,112 + PS417_27845 0.70 +2.2 6,003,113 - PS417_27845 0.70 +0.2 6,003,113 - PS417_27845 0.70 +0.5 6,003,116 + PS417_27845 0.70 +0.1 6,003,325 - -0.7 6,003,328 + -0.6 6,003,328 + +0.3 6,003,328 + -0.7 6,003,328 + +0.5 6,003,328 + +0.4 6,003,328 + -0.5 6,003,329 - -0.0 6,003,329 - -0.5 6,003,329 - -0.9 6,003,397 - -0.6
Or see this region's nucleotide sequence