Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27260 and PS417_27265 are separated by 163 nucleotides PS417_27265 and PS417_27270 are separated by 161 nucleotides
PS417_27260: PS417_27260 - iron ABC transporter permease, at 5,883,768 to 5,885,384
_27260
PS417_27265: PS417_27265 - iron ABC transporter substrate-binding protein, at 5,885,548 to 5,886,552
_27265
PS417_27270: PS417_27270 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 5,886,714 to 5,887,937
_27270
Position (kb)
5885
5886
5887 Strain fitness (log2 ratio)
-1
0
1
2 at 5884.630 kb on + strand, within PS417_27260 at 5884.714 kb on + strand, within PS417_27260 at 5884.714 kb on + strand, within PS417_27260 at 5884.715 kb on - strand, within PS417_27260 at 5884.715 kb on - strand, within PS417_27260 at 5884.715 kb on - strand, within PS417_27260 at 5884.823 kb on + strand, within PS417_27260 at 5884.930 kb on + strand, within PS417_27260 at 5884.936 kb on + strand, within PS417_27260 at 5884.936 kb on + strand, within PS417_27260 at 5884.937 kb on - strand, within PS417_27260 at 5884.943 kb on - strand, within PS417_27260 at 5885.086 kb on + strand, within PS417_27260 at 5885.087 kb on - strand, within PS417_27260 at 5885.285 kb on + strand at 5885.357 kb on - strand at 5885.549 kb on + strand at 5885.888 kb on + strand, within PS417_27265 at 5885.889 kb on - strand, within PS417_27265 at 5885.889 kb on - strand, within PS417_27265 at 5885.889 kb on - strand, within PS417_27265 at 5885.889 kb on - strand, within PS417_27265 at 5885.891 kb on + strand, within PS417_27265 at 5885.891 kb on + strand, within PS417_27265 at 5885.891 kb on + strand, within PS417_27265 at 5885.892 kb on - strand, within PS417_27265 at 5885.892 kb on - strand, within PS417_27265 at 5885.895 kb on + strand, within PS417_27265 at 5885.895 kb on + strand, within PS417_27265 at 5886.060 kb on - strand, within PS417_27265 at 5886.122 kb on + strand, within PS417_27265 at 5886.122 kb on + strand, within PS417_27265 at 5886.122 kb on + strand, within PS417_27265 at 5886.123 kb on - strand, within PS417_27265 at 5886.201 kb on + strand, within PS417_27265 at 5886.202 kb on - strand at 5886.202 kb on - strand, within PS417_27265 at 5886.419 kb on + strand, within PS417_27265 at 5886.419 kb on + strand, within PS417_27265 at 5886.420 kb on - strand, within PS417_27265 at 5886.420 kb on - strand, within PS417_27265 at 5886.464 kb on + strand at 5886.765 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,884,630 + PS417_27260 0.53 -0.8 5,884,714 + PS417_27260 0.59 -1.6 5,884,714 + PS417_27260 0.59 -0.8 5,884,715 - PS417_27260 0.59 +0.0 5,884,715 - PS417_27260 0.59 -0.7 5,884,715 - PS417_27260 0.59 -0.9 5,884,823 + PS417_27260 0.65 -1.3 5,884,930 + PS417_27260 0.72 -0.5 5,884,936 + PS417_27260 0.72 -0.9 5,884,936 + PS417_27260 0.72 -0.0 5,884,937 - PS417_27260 0.72 +0.6 5,884,943 - PS417_27260 0.73 -0.4 5,885,086 + PS417_27260 0.82 -0.2 5,885,087 - PS417_27260 0.82 -0.9 5,885,285 + -1.0 5,885,357 - +0.2 5,885,549 + +0.5 5,885,888 + PS417_27265 0.34 +2.1 5,885,889 - PS417_27265 0.34 +0.4 5,885,889 - PS417_27265 0.34 -1.0 5,885,889 - PS417_27265 0.34 -0.3 5,885,889 - PS417_27265 0.34 -0.2 5,885,891 + PS417_27265 0.34 -0.2 5,885,891 + PS417_27265 0.34 +0.1 5,885,891 + PS417_27265 0.34 -0.2 5,885,892 - PS417_27265 0.34 +1.5 5,885,892 - PS417_27265 0.34 -0.4 5,885,895 + PS417_27265 0.35 -0.5 5,885,895 + PS417_27265 0.35 -1.4 5,886,060 - PS417_27265 0.51 +2.6 5,886,122 + PS417_27265 0.57 -1.7 5,886,122 + PS417_27265 0.57 +0.6 5,886,122 + PS417_27265 0.57 +0.3 5,886,123 - PS417_27265 0.57 -0.6 5,886,201 + PS417_27265 0.65 -0.7 5,886,202 - +1.9 5,886,202 - PS417_27265 0.65 -0.1 5,886,419 + PS417_27265 0.87 +0.4 5,886,419 + PS417_27265 0.87 -0.7 5,886,420 - PS417_27265 0.87 +2.0 5,886,420 - PS417_27265 0.87 +0.8 5,886,464 + +1.3 5,886,765 + -0.1
Or see this region's nucleotide sequence