Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27010 and PS417_27015 are separated by 137 nucleotides PS417_27015 and PS417_27020 are separated by 33 nucleotides
PS417_27010: PS417_27010 - threonine dehydratase, at 5,832,441 to 5,833,955
_27010
PS417_27015: PS417_27015 - ribose 5-phosphate isomerase, at 5,834,093 to 5,834,764
_27015
PS417_27020: PS417_27020 - DNA-binding protein, at 5,834,798 to 5,835,712
_27020
Position (kb)
5834
5835 Strain fitness (log2 ratio)
-2
-1
0
1 at 5833.153 kb on + strand, within PS417_27010 at 5833.154 kb on - strand, within PS417_27010 at 5833.213 kb on + strand, within PS417_27010 at 5833.213 kb on + strand, within PS417_27010 at 5833.213 kb on + strand, within PS417_27010 at 5833.214 kb on - strand, within PS417_27010 at 5833.214 kb on - strand, within PS417_27010 at 5833.381 kb on + strand at 5833.381 kb on + strand, within PS417_27010 at 5833.390 kb on + strand, within PS417_27010 at 5833.391 kb on - strand, within PS417_27010 at 5833.391 kb on - strand, within PS417_27010 at 5833.391 kb on - strand, within PS417_27010 at 5833.532 kb on - strand, within PS417_27010 at 5833.532 kb on - strand, within PS417_27010 at 5833.532 kb on - strand, within PS417_27010 at 5833.532 kb on - strand, within PS417_27010 at 5833.537 kb on + strand, within PS417_27010 at 5833.538 kb on - strand, within PS417_27010 at 5833.789 kb on + strand, within PS417_27010 at 5833.790 kb on - strand, within PS417_27010 at 5833.790 kb on - strand, within PS417_27010 at 5833.942 kb on + strand at 5833.943 kb on - strand at 5834.048 kb on + strand at 5834.048 kb on + strand at 5834.050 kb on + strand at 5834.050 kb on + strand at 5834.050 kb on + strand at 5834.051 kb on - strand at 5834.051 kb on - strand at 5834.823 kb on + strand at 5834.823 kb on + strand at 5834.823 kb on + strand at 5834.823 kb on + strand at 5834.823 kb on + strand at 5834.824 kb on - strand at 5834.824 kb on - strand at 5834.824 kb on - strand at 5834.824 kb on - strand at 5834.824 kb on - strand at 5835.024 kb on + strand, within PS417_27020 at 5835.096 kb on + strand, within PS417_27020 at 5835.138 kb on + strand, within PS417_27020 at 5835.139 kb on - strand, within PS417_27020 at 5835.139 kb on - strand, within PS417_27020 at 5835.195 kb on + strand, within PS417_27020 at 5835.336 kb on + strand, within PS417_27020 at 5835.336 kb on + strand, within PS417_27020 at 5835.337 kb on - strand, within PS417_27020 at 5835.395 kb on - strand, within PS417_27020 at 5835.448 kb on + strand, within PS417_27020 at 5835.483 kb on + strand, within PS417_27020 at 5835.483 kb on + strand, within PS417_27020 at 5835.483 kb on + strand, within PS417_27020 at 5835.484 kb on - strand, within PS417_27020 at 5835.522 kb on - strand, within PS417_27020 at 5835.746 kb on + strand at 5835.747 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,833,153 + PS417_27010 0.47 +0.2 5,833,154 - PS417_27010 0.47 +0.4 5,833,213 + PS417_27010 0.51 -0.1 5,833,213 + PS417_27010 0.51 -0.1 5,833,213 + PS417_27010 0.51 +0.4 5,833,214 - PS417_27010 0.51 -0.1 5,833,214 - PS417_27010 0.51 +0.3 5,833,381 + +1.1 5,833,381 + PS417_27010 0.62 -0.2 5,833,390 + PS417_27010 0.63 -0.0 5,833,391 - PS417_27010 0.63 +0.5 5,833,391 - PS417_27010 0.63 -0.8 5,833,391 - PS417_27010 0.63 +1.7 5,833,532 - PS417_27010 0.72 +0.1 5,833,532 - PS417_27010 0.72 +0.8 5,833,532 - PS417_27010 0.72 -0.6 5,833,532 - PS417_27010 0.72 -0.3 5,833,537 + PS417_27010 0.72 -0.3 5,833,538 - PS417_27010 0.72 +0.6 5,833,789 + PS417_27010 0.89 +0.5 5,833,790 - PS417_27010 0.89 -0.1 5,833,790 - PS417_27010 0.89 -0.0 5,833,942 + +0.5 5,833,943 - +1.2 5,834,048 + -1.0 5,834,048 + -1.9 5,834,050 + +0.1 5,834,050 + +0.4 5,834,050 + -1.1 5,834,051 - -0.5 5,834,051 - -1.0 5,834,823 + -0.7 5,834,823 + -0.9 5,834,823 + -0.3 5,834,823 + -0.5 5,834,823 + -0.0 5,834,824 - +0.4 5,834,824 - +1.0 5,834,824 - +0.4 5,834,824 - +0.2 5,834,824 - -0.1 5,835,024 + PS417_27020 0.25 -0.0 5,835,096 + PS417_27020 0.33 -0.9 5,835,138 + PS417_27020 0.37 +0.1 5,835,139 - PS417_27020 0.37 -0.8 5,835,139 - PS417_27020 0.37 +0.2 5,835,195 + PS417_27020 0.43 +1.1 5,835,336 + PS417_27020 0.59 +0.3 5,835,336 + PS417_27020 0.59 +0.4 5,835,337 - PS417_27020 0.59 +0.0 5,835,395 - PS417_27020 0.65 +0.5 5,835,448 + PS417_27020 0.71 +0.4 5,835,483 + PS417_27020 0.75 -2.1 5,835,483 + PS417_27020 0.75 -0.1 5,835,483 + PS417_27020 0.75 +0.8 5,835,484 - PS417_27020 0.75 -0.1 5,835,522 - PS417_27020 0.79 -0.1 5,835,746 + -0.1 5,835,747 - -0.3
Or see this region's nucleotide sequence