Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24670 and PS417_24675 are separated by 228 nucleotides PS417_24675 and PS417_24680 are separated by 61 nucleotides PS417_24680 and PS417_24685 are separated by 130 nucleotides
PS417_24670: PS417_24670 - DNA polymerase III subunit delta, at 5,353,644 to 5,354,681
_24670
PS417_24675: PS417_24675 - lipoyl synthase, at 5,354,910 to 5,355,074
_24675
PS417_24680: PS417_24680 - murein transglycosylase, at 5,355,136 to 5,356,461
_24680
PS417_24685: PS417_24685 - peptidase S66, at 5,356,592 to 5,357,512
_24685
Position (kb)
5355
5356
5357 Strain fitness (log2 ratio)
-2
-1
0
1 at 5354.808 kb on - strand at 5354.818 kb on - strand at 5354.829 kb on + strand at 5354.829 kb on + strand at 5354.829 kb on + strand at 5354.830 kb on - strand at 5354.830 kb on - strand at 5354.830 kb on - strand at 5354.830 kb on - strand at 5354.830 kb on - strand at 5355.039 kb on - strand, within PS417_24675 at 5355.041 kb on + strand, within PS417_24675 at 5355.042 kb on - strand, within PS417_24675 at 5355.042 kb on - strand, within PS417_24675 at 5355.058 kb on - strand at 5355.058 kb on - strand at 5355.098 kb on + strand at 5355.098 kb on + strand at 5355.098 kb on + strand at 5355.099 kb on - strand at 5355.099 kb on - strand at 5355.099 kb on - strand at 5355.119 kb on - strand at 5355.119 kb on - strand at 5355.491 kb on - strand, within PS417_24680 at 5355.491 kb on - strand, within PS417_24680 at 5355.521 kb on + strand, within PS417_24680 at 5355.522 kb on - strand, within PS417_24680 at 5355.522 kb on - strand, within PS417_24680 at 5355.526 kb on - strand, within PS417_24680 at 5355.550 kb on + strand, within PS417_24680 at 5355.654 kb on + strand, within PS417_24680 at 5355.655 kb on - strand, within PS417_24680 at 5355.688 kb on + strand, within PS417_24680 at 5355.689 kb on - strand, within PS417_24680 at 5355.829 kb on + strand, within PS417_24680 at 5355.829 kb on + strand, within PS417_24680 at 5355.829 kb on + strand, within PS417_24680 at 5355.829 kb on + strand, within PS417_24680 at 5355.830 kb on - strand, within PS417_24680 at 5355.830 kb on - strand, within PS417_24680 at 5355.830 kb on - strand, within PS417_24680 at 5355.830 kb on - strand, within PS417_24680 at 5355.830 kb on - strand, within PS417_24680 at 5356.174 kb on + strand, within PS417_24680 at 5356.174 kb on + strand, within PS417_24680 at 5356.174 kb on + strand, within PS417_24680 at 5356.175 kb on - strand, within PS417_24680 at 5356.175 kb on - strand, within PS417_24680 at 5356.294 kb on - strand, within PS417_24680 at 5356.328 kb on - strand, within PS417_24680 at 5356.469 kb on + strand at 5356.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,354,808 - -0.7 5,354,818 - -0.1 5,354,829 + -0.2 5,354,829 + -0.5 5,354,829 + -0.8 5,354,830 - -0.3 5,354,830 - -0.3 5,354,830 - -2.1 5,354,830 - +0.7 5,354,830 - -1.6 5,355,039 - PS417_24675 0.78 -1.6 5,355,041 + PS417_24675 0.79 -0.8 5,355,042 - PS417_24675 0.80 -1.0 5,355,042 - PS417_24675 0.80 -0.8 5,355,058 - +0.0 5,355,058 - +0.2 5,355,098 + -0.9 5,355,098 + -0.9 5,355,098 + -1.4 5,355,099 - -0.7 5,355,099 - -0.9 5,355,099 - -0.2 5,355,119 - -1.5 5,355,119 - -1.2 5,355,491 - PS417_24680 0.27 -1.0 5,355,491 - PS417_24680 0.27 -0.6 5,355,521 + PS417_24680 0.29 -1.2 5,355,522 - PS417_24680 0.29 -1.5 5,355,522 - PS417_24680 0.29 -1.0 5,355,526 - PS417_24680 0.29 -1.0 5,355,550 + PS417_24680 0.31 -1.2 5,355,654 + PS417_24680 0.39 -1.5 5,355,655 - PS417_24680 0.39 -0.7 5,355,688 + PS417_24680 0.42 -1.1 5,355,689 - PS417_24680 0.42 -0.9 5,355,829 + PS417_24680 0.52 -2.0 5,355,829 + PS417_24680 0.52 -1.5 5,355,829 + PS417_24680 0.52 -1.0 5,355,829 + PS417_24680 0.52 -0.1 5,355,830 - PS417_24680 0.52 -0.9 5,355,830 - PS417_24680 0.52 -0.4 5,355,830 - PS417_24680 0.52 -2.2 5,355,830 - PS417_24680 0.52 -1.5 5,355,830 - PS417_24680 0.52 -1.3 5,356,174 + PS417_24680 0.78 -1.1 5,356,174 + PS417_24680 0.78 -0.8 5,356,174 + PS417_24680 0.78 -0.2 5,356,175 - PS417_24680 0.78 -2.0 5,356,175 - PS417_24680 0.78 -1.6 5,356,294 - PS417_24680 0.87 -0.8 5,356,328 - PS417_24680 0.90 -1.2 5,356,469 + -1.2 5,356,470 - -0.6
Or see this region's nucleotide sequence