Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22530 and PS417_22535 are separated by 13 nucleotides PS417_22535 and PS417_22540 are separated by 124 nucleotides
PS417_22530: PS417_22530 - hypothetical protein, at 4,876,670 to 4,877,614
_22530
PS417_22535: PS417_22535 - ornithine acetyltransferase, at 4,877,628 to 4,878,845
_22535
PS417_22540: PS417_22540 - preprotein translocase subunit SecA, at 4,878,970 to 4,881,705
_22540
Position (kb)
4877
4878
4879 Strain fitness (log2 ratio)
-2
-1
0
1 at 4876.975 kb on + strand, within PS417_22530 at 4876.975 kb on + strand, within PS417_22530 at 4877.277 kb on + strand, within PS417_22530 at 4877.277 kb on + strand, within PS417_22530 at 4877.277 kb on + strand, within PS417_22530 at 4877.278 kb on - strand, within PS417_22530 at 4877.597 kb on + strand at 4877.598 kb on - strand at 4877.598 kb on - strand at 4877.598 kb on - strand at 4877.629 kb on + strand at 4877.630 kb on - strand at 4877.630 kb on - strand at 4877.660 kb on - strand at 4877.774 kb on - strand, within PS417_22535 at 4877.947 kb on + strand, within PS417_22535 at 4877.952 kb on + strand, within PS417_22535 at 4877.952 kb on + strand, within PS417_22535 at 4877.952 kb on + strand, within PS417_22535 at 4877.952 kb on + strand, within PS417_22535 at 4877.953 kb on - strand, within PS417_22535 at 4877.953 kb on - strand, within PS417_22535 at 4878.268 kb on + strand, within PS417_22535 at 4878.508 kb on + strand, within PS417_22535 at 4878.949 kb on + strand at 4878.949 kb on + strand at 4878.950 kb on - strand at 4878.950 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 4,876,975 + PS417_22530 0.32 -0.7 4,876,975 + PS417_22530 0.32 -1.0 4,877,277 + PS417_22530 0.64 -0.5 4,877,277 + PS417_22530 0.64 -0.1 4,877,277 + PS417_22530 0.64 -1.4 4,877,278 - PS417_22530 0.64 -0.0 4,877,597 + +1.0 4,877,598 - +0.7 4,877,598 - -0.4 4,877,598 - +0.3 4,877,629 + +1.1 4,877,630 - +0.4 4,877,630 - +0.0 4,877,660 - +0.4 4,877,774 - PS417_22535 0.12 -1.4 4,877,947 + PS417_22535 0.26 -0.8 4,877,952 + PS417_22535 0.27 -0.5 4,877,952 + PS417_22535 0.27 -1.0 4,877,952 + PS417_22535 0.27 -1.1 4,877,952 + PS417_22535 0.27 -1.2 4,877,953 - PS417_22535 0.27 -1.4 4,877,953 - PS417_22535 0.27 -1.4 4,878,268 + PS417_22535 0.53 -1.1 4,878,508 + PS417_22535 0.72 -2.5 4,878,949 + -1.5 4,878,949 + -0.2 4,878,950 - +1.1 4,878,950 - -0.1
Or see this region's nucleotide sequence