Strain Fitness in Pseudomonas simiae WCS417 around PS417_22430

Experiment: Fraxetin 3 mM; solid stress

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPS417_22425 and PS417_22430 overlap by 1 nucleotidesPS417_22430 and PS417_22435 are separated by 14 nucleotidesPS417_22435 and PS417_22440 are separated by 1 nucleotides PS417_22425: PS417_22425 - cell envelope biogenesis protein TolA, at 4,857,889 to 4,858,962 _22425 PS417_22430: PS417_22430 - biopolymer transporter TolR, at 4,858,962 to 4,859,423 _22430 PS417_22435: PS417_22435 - protein tolQ, at 4,859,438 to 4,860,133 _22435 PS417_22440: PS417_22440 - 4-hydroxybenzoyl-CoA thioesterase, at 4,860,135 to 4,860,590 _22440 Position (kb) 4858 4859 4860Strain fitness (log2 ratio) -1 0 1at 4859.440 kb on - strandat 4860.193 kb on - strand, within PS417_22440

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Per-strain Table

Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress
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4,859,440 - -0.5
4,860,193 - PS417_22440 0.13 -1.2

Or see this region's nucleotide sequence