Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21930 and PS417_21935 are separated by 88 nucleotides PS417_21935 and PS417_21940 are separated by 11 nucleotides PS417_21940 and PS417_21945 are separated by 204 nucleotides
PS417_21930: PS417_21930 - membrane protein, at 4,758,864 to 4,759,328
_21930
PS417_21935: PS417_21935 - transcriptional regulator, at 4,759,417 to 4,760,271
_21935
PS417_21940: PS417_21940 - hypothetical protein, at 4,760,283 to 4,760,528
_21940
PS417_21945: PS417_21945 - RNA polymerase subunit sigma-24, at 4,760,733 to 4,761,956
_21945
Position (kb) 4760
4761 Strain fitness (log2 ratio) -1
0
1 at 4759.391 kb on - strand at 4759.554 kb on - strand, within PS417_21935 at 4759.721 kb on - strand, within PS417_21935 at 4759.721 kb on - strand, within PS417_21935 at 4759.959 kb on - strand, within PS417_21935 at 4760.117 kb on + strand, within PS417_21935 at 4760.323 kb on + strand at 4760.394 kb on - strand, within PS417_21940 at 4760.592 kb on + strand at 4760.722 kb on + strand at 4760.821 kb on + strand at 4760.894 kb on - strand, within PS417_21945 at 4761.022 kb on - strand, within PS417_21945 at 4761.022 kb on - strand, within PS417_21945 at 4761.022 kb on - strand, within PS417_21945 at 4761.028 kb on + strand, within PS417_21945 at 4761.028 kb on + strand, within PS417_21945 at 4761.409 kb on + strand, within PS417_21945 at 4761.409 kb on + strand, within PS417_21945 at 4761.409 kb on + strand, within PS417_21945 at 4761.424 kb on - strand, within PS417_21945
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 4,759,391 - +0.4 4,759,554 - PS417_21935 0.16 -1.5 4,759,721 - PS417_21935 0.36 -0.2 4,759,721 - PS417_21935 0.36 +0.0 4,759,959 - PS417_21935 0.63 -0.3 4,760,117 + PS417_21935 0.82 +0.8 4,760,323 + +1.7 4,760,394 - PS417_21940 0.45 +0.2 4,760,592 + -0.6 4,760,722 + +0.3 4,760,821 + -0.1 4,760,894 - PS417_21945 0.13 -0.3 4,761,022 - PS417_21945 0.24 -1.3 4,761,022 - PS417_21945 0.24 +0.6 4,761,022 - PS417_21945 0.24 -0.1 4,761,028 + PS417_21945 0.24 +0.8 4,761,028 + PS417_21945 0.24 -1.6 4,761,409 + PS417_21945 0.55 -1.1 4,761,409 + PS417_21945 0.55 -0.3 4,761,409 + PS417_21945 0.55 -0.5 4,761,424 - PS417_21945 0.56 +0.6
Or see this region's nucleotide sequence