Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14125 and PS417_14130 are separated by 77 nucleotides PS417_14130 and PS417_14135 are separated by 124 nucleotides
PS417_14125: PS417_14125 - molybdenum ABC transporter ATP-binding protein, at 3,098,178 to 3,099,257
_14125
PS417_14130: PS417_14130 - DNA topoisomerase, at 3,099,335 to 3,100,372
_14130
PS417_14135: PS417_14135 - ABC transporter ATP-binding protein, at 3,100,497 to 3,102,119
_14135
Position (kb)
3099
3100
3101 Strain fitness (log2 ratio)
-1
0
1
2 at 3098.340 kb on - strand, within PS417_14125 at 3098.415 kb on + strand, within PS417_14125 at 3098.697 kb on + strand, within PS417_14125 at 3098.739 kb on + strand, within PS417_14125 at 3098.740 kb on - strand, within PS417_14125 at 3098.884 kb on + strand at 3099.303 kb on - strand at 3099.368 kb on + strand at 3099.368 kb on + strand at 3099.369 kb on - strand at 3099.409 kb on - strand at 3099.425 kb on + strand at 3099.514 kb on - strand, within PS417_14130 at 3099.626 kb on + strand, within PS417_14130 at 3099.626 kb on + strand, within PS417_14130 at 3099.780 kb on - strand, within PS417_14130 at 3099.801 kb on - strand, within PS417_14130 at 3100.022 kb on + strand, within PS417_14130 at 3100.214 kb on + strand, within PS417_14130 at 3100.214 kb on + strand, within PS417_14130 at 3100.214 kb on + strand, within PS417_14130 at 3100.215 kb on - strand, within PS417_14130 at 3100.420 kb on + strand at 3100.420 kb on + strand at 3100.421 kb on - strand at 3100.421 kb on - strand at 3100.715 kb on + strand, within PS417_14135 at 3100.716 kb on - strand, within PS417_14135 at 3100.716 kb on - strand, within PS417_14135 at 3100.716 kb on - strand, within PS417_14135 at 3100.719 kb on + strand, within PS417_14135 at 3100.719 kb on + strand, within PS417_14135 at 3100.720 kb on - strand, within PS417_14135 at 3100.720 kb on - strand, within PS417_14135 at 3100.720 kb on - strand, within PS417_14135 at 3100.720 kb on - strand, within PS417_14135 at 3100.720 kb on - strand, within PS417_14135 at 3101.166 kb on + strand, within PS417_14135 at 3101.166 kb on + strand, within PS417_14135 at 3101.167 kb on - strand, within PS417_14135 at 3101.178 kb on + strand, within PS417_14135 at 3101.178 kb on + strand, within PS417_14135 at 3101.178 kb on + strand, within PS417_14135 at 3101.178 kb on + strand, within PS417_14135
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 3,098,340 - PS417_14125 0.15 -1.2 3,098,415 + PS417_14125 0.22 -1.4 3,098,697 + PS417_14125 0.48 -0.9 3,098,739 + PS417_14125 0.52 -1.2 3,098,740 - PS417_14125 0.52 -1.0 3,098,884 + +2.4 3,099,303 - +0.2 3,099,368 + -0.2 3,099,368 + +0.1 3,099,369 - +0.2 3,099,409 - +0.7 3,099,425 + -1.7 3,099,514 - PS417_14130 0.17 +1.4 3,099,626 + PS417_14130 0.28 -0.3 3,099,626 + PS417_14130 0.28 +0.0 3,099,780 - PS417_14130 0.43 +0.9 3,099,801 - PS417_14130 0.45 +0.3 3,100,022 + PS417_14130 0.66 -0.1 3,100,214 + PS417_14130 0.85 -0.0 3,100,214 + PS417_14130 0.85 +0.4 3,100,214 + PS417_14130 0.85 +0.1 3,100,215 - PS417_14130 0.85 -0.2 3,100,420 + +0.3 3,100,420 + +0.3 3,100,421 - +0.0 3,100,421 - +0.2 3,100,715 + PS417_14135 0.13 +0.5 3,100,716 - PS417_14135 0.13 -0.5 3,100,716 - PS417_14135 0.13 +0.8 3,100,716 - PS417_14135 0.13 +1.1 3,100,719 + PS417_14135 0.14 -0.3 3,100,719 + PS417_14135 0.14 +0.3 3,100,720 - PS417_14135 0.14 +0.7 3,100,720 - PS417_14135 0.14 +0.2 3,100,720 - PS417_14135 0.14 -0.5 3,100,720 - PS417_14135 0.14 +0.6 3,100,720 - PS417_14135 0.14 +0.4 3,101,166 + PS417_14135 0.41 +0.1 3,101,166 + PS417_14135 0.41 -0.1 3,101,167 - PS417_14135 0.41 -0.1 3,101,178 + PS417_14135 0.42 -0.1 3,101,178 + PS417_14135 0.42 +0.1 3,101,178 + PS417_14135 0.42 -0.3 3,101,178 + PS417_14135 0.42 -0.1
Or see this region's nucleotide sequence