Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13865 and PS417_13870 are separated by 70 nucleotides PS417_13870 and PS417_13875 are separated by 144 nucleotides
PS417_13865: PS417_13865 - bestrophin, at 3,045,752 to 3,046,645
_13865
PS417_13870: PS417_13870 - hypothetical protein, at 3,046,716 to 3,047,774
_13870
PS417_13875: PS417_13875 - circadian clock protein KaiC, at 3,047,919 to 3,049,418
_13875
Position (kb)
3046
3047
3048 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3045.756 kb on + strand at 3045.757 kb on - strand at 3045.894 kb on - strand, within PS417_13865 at 3045.977 kb on + strand at 3045.977 kb on + strand, within PS417_13865 at 3046.159 kb on + strand, within PS417_13865 at 3046.275 kb on - strand, within PS417_13865 at 3046.361 kb on + strand, within PS417_13865 at 3046.363 kb on + strand, within PS417_13865 at 3046.364 kb on - strand, within PS417_13865 at 3046.364 kb on - strand, within PS417_13865 at 3046.388 kb on + strand, within PS417_13865 at 3046.389 kb on - strand, within PS417_13865 at 3046.389 kb on - strand, within PS417_13865 at 3046.389 kb on - strand, within PS417_13865 at 3046.470 kb on - strand, within PS417_13865 at 3046.578 kb on + strand at 3046.578 kb on + strand at 3046.631 kb on + strand at 3046.631 kb on + strand at 3046.632 kb on - strand at 3046.734 kb on + strand at 3046.734 kb on + strand at 3046.785 kb on + strand at 3046.893 kb on + strand, within PS417_13870 at 3046.893 kb on + strand, within PS417_13870 at 3046.962 kb on + strand, within PS417_13870 at 3047.271 kb on + strand, within PS417_13870 at 3047.272 kb on - strand, within PS417_13870 at 3047.410 kb on + strand, within PS417_13870 at 3047.676 kb on + strand at 3047.677 kb on - strand at 3047.850 kb on - strand at 3047.850 kb on - strand at 3047.864 kb on - strand at 3047.925 kb on - strand at 3048.062 kb on - strand at 3048.103 kb on + strand, within PS417_13875 at 3048.104 kb on - strand, within PS417_13875 at 3048.104 kb on - strand, within PS417_13875 at 3048.105 kb on + strand, within PS417_13875 at 3048.105 kb on + strand, within PS417_13875 at 3048.105 kb on + strand, within PS417_13875 at 3048.105 kb on + strand at 3048.106 kb on - strand, within PS417_13875 at 3048.106 kb on - strand, within PS417_13875 at 3048.106 kb on - strand, within PS417_13875 at 3048.106 kb on - strand, within PS417_13875 at 3048.106 kb on - strand at 3048.106 kb on - strand, within PS417_13875 at 3048.107 kb on + strand, within PS417_13875 at 3048.107 kb on + strand, within PS417_13875 at 3048.107 kb on + strand, within PS417_13875 at 3048.107 kb on + strand, within PS417_13875 at 3048.107 kb on + strand, within PS417_13875 at 3048.107 kb on + strand, within PS417_13875 at 3048.180 kb on - strand, within PS417_13875 at 3048.180 kb on - strand, within PS417_13875 at 3048.180 kb on - strand, within PS417_13875 at 3048.247 kb on - strand, within PS417_13875 at 3048.405 kb on + strand, within PS417_13875 at 3048.405 kb on + strand, within PS417_13875 at 3048.406 kb on - strand, within PS417_13875 at 3048.417 kb on + strand, within PS417_13875 at 3048.418 kb on - strand, within PS417_13875 at 3048.418 kb on - strand, within PS417_13875 at 3048.526 kb on - strand, within PS417_13875 at 3048.561 kb on + strand, within PS417_13875
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 3,045,756 + -0.5 3,045,757 - -0.4 3,045,894 - PS417_13865 0.16 +0.9 3,045,977 + +1.2 3,045,977 + PS417_13865 0.25 -1.3 3,046,159 + PS417_13865 0.46 -1.0 3,046,275 - PS417_13865 0.59 -0.2 3,046,361 + PS417_13865 0.68 -0.2 3,046,363 + PS417_13865 0.68 -0.3 3,046,364 - PS417_13865 0.68 -1.2 3,046,364 - PS417_13865 0.68 -0.6 3,046,388 + PS417_13865 0.71 -0.4 3,046,389 - PS417_13865 0.71 -0.4 3,046,389 - PS417_13865 0.71 -0.8 3,046,389 - PS417_13865 0.71 -0.2 3,046,470 - PS417_13865 0.80 +0.2 3,046,578 + -0.0 3,046,578 + -1.0 3,046,631 + -0.4 3,046,631 + +0.0 3,046,632 - -0.3 3,046,734 + -1.1 3,046,734 + -2.2 3,046,785 + -1.0 3,046,893 + PS417_13870 0.17 -2.0 3,046,893 + PS417_13870 0.17 -0.1 3,046,962 + PS417_13870 0.23 -3.2 3,047,271 + PS417_13870 0.52 -1.7 3,047,272 - PS417_13870 0.53 -3.0 3,047,410 + PS417_13870 0.66 -1.4 3,047,676 + -1.7 3,047,677 - -0.9 3,047,850 - -0.1 3,047,850 - +0.2 3,047,864 - -0.1 3,047,925 - -0.3 3,048,062 - -0.3 3,048,103 + PS417_13875 0.12 +2.0 3,048,104 - PS417_13875 0.12 +0.2 3,048,104 - PS417_13875 0.12 -0.6 3,048,105 + PS417_13875 0.12 -0.3 3,048,105 + PS417_13875 0.12 +0.7 3,048,105 + PS417_13875 0.12 -0.2 3,048,105 + +1.7 3,048,106 - PS417_13875 0.12 +0.0 3,048,106 - PS417_13875 0.12 +0.8 3,048,106 - PS417_13875 0.12 -0.6 3,048,106 - PS417_13875 0.12 +0.3 3,048,106 - +0.5 3,048,106 - PS417_13875 0.12 -0.4 3,048,107 + PS417_13875 0.13 +0.6 3,048,107 + PS417_13875 0.13 +0.4 3,048,107 + PS417_13875 0.13 +2.2 3,048,107 + PS417_13875 0.13 +2.1 3,048,107 + PS417_13875 0.13 -0.6 3,048,107 + PS417_13875 0.13 +1.1 3,048,180 - PS417_13875 0.17 -0.6 3,048,180 - PS417_13875 0.17 +0.4 3,048,180 - PS417_13875 0.17 -0.3 3,048,247 - PS417_13875 0.22 -1.3 3,048,405 + PS417_13875 0.32 +0.2 3,048,405 + PS417_13875 0.32 +0.9 3,048,406 - PS417_13875 0.32 -0.3 3,048,417 + PS417_13875 0.33 +0.6 3,048,418 - PS417_13875 0.33 -0.7 3,048,418 - PS417_13875 0.33 -0.3 3,048,526 - PS417_13875 0.40 -0.2 3,048,561 + PS417_13875 0.43 -0.2
Or see this region's nucleotide sequence