Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13110 and PS417_13115 are separated by 141 nucleotides PS417_13115 and PS417_13120 are separated by 297 nucleotides PS417_13120 and PS417_13125 are separated by 21 nucleotides
PS417_13110: PS417_13110 - methylase, at 2,864,997 to 2,865,809
_13110
PS417_13115: PS417_13115 - hypothetical protein, at 2,865,951 to 2,866,337
_13115
PS417_13120: PS417_13120 - aspartyl beta-hydroxylase, at 2,866,635 to 2,867,534
_13120
PS417_13125: PS417_13125 - ATP-dependent DNA ligase, at 2,867,556 to 2,870,015
_13125
Position (kb)
2866
2867
2868 Strain fitness (log2 ratio)
-2
-1
0
1 at 2865.636 kb on + strand, within PS417_13110 at 2865.636 kb on + strand, within PS417_13110 at 2865.636 kb on + strand, within PS417_13110 at 2865.735 kb on + strand at 2865.780 kb on - strand at 2865.879 kb on + strand at 2865.879 kb on + strand at 2865.891 kb on + strand at 2865.891 kb on + strand at 2865.892 kb on - strand at 2865.893 kb on + strand at 2866.086 kb on - strand, within PS417_13115 at 2866.118 kb on + strand, within PS417_13115 at 2866.324 kb on - strand at 2866.338 kb on - strand at 2866.338 kb on - strand at 2866.338 kb on - strand at 2866.338 kb on - strand at 2866.460 kb on + strand at 2866.460 kb on + strand at 2866.678 kb on - strand at 2866.678 kb on - strand at 2866.678 kb on - strand at 2866.678 kb on - strand at 2866.678 kb on - strand at 2866.678 kb on - strand at 2866.681 kb on + strand at 2866.681 kb on + strand at 2866.682 kb on - strand at 2866.682 kb on - strand at 2866.768 kb on - strand, within PS417_13120 at 2866.797 kb on + strand, within PS417_13120 at 2866.797 kb on + strand, within PS417_13120 at 2866.911 kb on + strand, within PS417_13120 at 2866.963 kb on - strand, within PS417_13120 at 2867.121 kb on + strand, within PS417_13120 at 2867.190 kb on + strand, within PS417_13120 at 2867.191 kb on - strand, within PS417_13120 at 2867.191 kb on - strand, within PS417_13120 at 2867.232 kb on + strand, within PS417_13120 at 2867.233 kb on - strand, within PS417_13120 at 2867.424 kb on + strand, within PS417_13120 at 2867.621 kb on - strand at 2867.803 kb on + strand, within PS417_13125 at 2868.365 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 2,865,636 + PS417_13110 0.79 -1.3 2,865,636 + PS417_13110 0.79 -0.3 2,865,636 + PS417_13110 0.79 -0.1 2,865,735 + +0.3 2,865,780 - -0.6 2,865,879 + -2.5 2,865,879 + -0.5 2,865,891 + -0.6 2,865,891 + +0.8 2,865,892 - +0.1 2,865,893 + -0.5 2,866,086 - PS417_13115 0.35 -1.5 2,866,118 + PS417_13115 0.43 +0.9 2,866,324 - -0.9 2,866,338 - -0.2 2,866,338 - -0.3 2,866,338 - -0.5 2,866,338 - -0.8 2,866,460 + -0.4 2,866,460 + +0.3 2,866,678 - -0.0 2,866,678 - -0.5 2,866,678 - -1.6 2,866,678 - -1.4 2,866,678 - -0.8 2,866,678 - -0.0 2,866,681 + -0.5 2,866,681 + +0.4 2,866,682 - +0.5 2,866,682 - -2.3 2,866,768 - PS417_13120 0.15 -1.5 2,866,797 + PS417_13120 0.18 -1.2 2,866,797 + PS417_13120 0.18 -0.2 2,866,911 + PS417_13120 0.31 -1.1 2,866,963 - PS417_13120 0.36 +0.7 2,867,121 + PS417_13120 0.54 -1.1 2,867,190 + PS417_13120 0.62 -2.4 2,867,191 - PS417_13120 0.62 -1.1 2,867,191 - PS417_13120 0.62 -1.2 2,867,232 + PS417_13120 0.66 -2.2 2,867,233 - PS417_13120 0.66 -0.3 2,867,424 + PS417_13120 0.88 -0.7 2,867,621 - -0.2 2,867,803 + PS417_13125 0.10 -0.2 2,868,365 - -0.9
Or see this region's nucleotide sequence