Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12385 and PS417_12390 overlap by 4 nucleotides PS417_12390 and PS417_12395 are separated by 13 nucleotides PS417_12395 and PS417_12400 are separated by 52 nucleotides
PS417_12385: PS417_12385 - hypothetical protein, at 2,693,739 to 2,693,999
_12385
PS417_12390: PS417_12390 - hypothetical protein, at 2,693,996 to 2,694,826
_12390
PS417_12395: PS417_12395 - aminopeptidase N, at 2,694,840 to 2,697,497
_12395
PS417_12400: PS417_12400 - oxidoreductase, at 2,697,550 to 2,698,596
_12400
Position (kb)
2694
2695
2696
2697
2698 Strain fitness (log2 ratio)
-2
-1
0
1 at 2694.195 kb on - strand, within PS417_12390 at 2694.264 kb on - strand, within PS417_12390 at 2694.678 kb on - strand, within PS417_12390 at 2694.784 kb on + strand at 2694.790 kb on + strand at 2694.795 kb on - strand at 2694.824 kb on + strand at 2694.824 kb on + strand at 2694.824 kb on + strand at 2694.824 kb on + strand at 2694.868 kb on - strand at 2695.185 kb on + strand, within PS417_12395 at 2695.185 kb on + strand, within PS417_12395 at 2695.245 kb on + strand, within PS417_12395 at 2695.245 kb on + strand, within PS417_12395 at 2695.246 kb on - strand, within PS417_12395 at 2695.246 kb on - strand, within PS417_12395 at 2695.246 kb on - strand, within PS417_12395 at 2695.248 kb on + strand, within PS417_12395 at 2695.455 kb on - strand at 2695.455 kb on - strand, within PS417_12395 at 2695.483 kb on + strand, within PS417_12395 at 2695.497 kb on + strand, within PS417_12395 at 2695.497 kb on + strand, within PS417_12395 at 2695.578 kb on + strand, within PS417_12395 at 2695.578 kb on + strand, within PS417_12395 at 2695.579 kb on - strand, within PS417_12395 at 2695.752 kb on + strand, within PS417_12395 at 2695.753 kb on - strand, within PS417_12395 at 2695.897 kb on - strand at 2695.983 kb on + strand, within PS417_12395 at 2695.984 kb on - strand, within PS417_12395 at 2695.984 kb on - strand, within PS417_12395 at 2695.998 kb on + strand, within PS417_12395 at 2696.175 kb on + strand, within PS417_12395 at 2696.217 kb on + strand, within PS417_12395 at 2696.218 kb on - strand, within PS417_12395 at 2696.345 kb on + strand, within PS417_12395 at 2697.391 kb on - strand at 2697.495 kb on + strand at 2697.495 kb on + strand at 2697.635 kb on - strand at 2698.040 kb on + strand, within PS417_12400 at 2698.108 kb on - strand, within PS417_12400 at 2698.346 kb on + strand, within PS417_12400 at 2698.347 kb on - strand, within PS417_12400 at 2698.347 kb on - strand, within PS417_12400 at 2698.347 kb on - strand, within PS417_12400 at 2698.425 kb on - strand, within PS417_12400
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 2,694,195 - PS417_12390 0.24 -1.2 2,694,264 - PS417_12390 0.32 +0.4 2,694,678 - PS417_12390 0.82 -0.4 2,694,784 + -1.5 2,694,790 + +0.2 2,694,795 - +0.1 2,694,824 + -0.2 2,694,824 + +0.3 2,694,824 + -0.6 2,694,824 + +0.8 2,694,868 - +0.3 2,695,185 + PS417_12395 0.13 +0.2 2,695,185 + PS417_12395 0.13 +0.8 2,695,245 + PS417_12395 0.15 +0.3 2,695,245 + PS417_12395 0.15 -0.5 2,695,246 - PS417_12395 0.15 +1.7 2,695,246 - PS417_12395 0.15 -0.4 2,695,246 - PS417_12395 0.15 -0.5 2,695,248 + PS417_12395 0.15 -0.2 2,695,455 - +0.5 2,695,455 - PS417_12395 0.23 -1.2 2,695,483 + PS417_12395 0.24 -0.5 2,695,497 + PS417_12395 0.25 -0.0 2,695,497 + PS417_12395 0.25 -0.2 2,695,578 + PS417_12395 0.28 -1.1 2,695,578 + PS417_12395 0.28 -0.7 2,695,579 - PS417_12395 0.28 -2.5 2,695,752 + PS417_12395 0.34 -1.4 2,695,753 - PS417_12395 0.34 -0.8 2,695,897 - +0.5 2,695,983 + PS417_12395 0.43 -1.0 2,695,984 - PS417_12395 0.43 -2.1 2,695,984 - PS417_12395 0.43 +0.0 2,695,998 + PS417_12395 0.44 -0.0 2,696,175 + PS417_12395 0.50 -0.4 2,696,217 + PS417_12395 0.52 -1.0 2,696,218 - PS417_12395 0.52 -0.7 2,696,345 + PS417_12395 0.57 -0.4 2,697,391 - -0.5 2,697,495 + +0.3 2,697,495 + -1.1 2,697,635 - -1.1 2,698,040 + PS417_12400 0.47 -0.8 2,698,108 - PS417_12400 0.53 +1.2 2,698,346 + PS417_12400 0.76 +0.2 2,698,347 - PS417_12400 0.76 +1.2 2,698,347 - PS417_12400 0.76 -0.2 2,698,347 - PS417_12400 0.76 +0.4 2,698,425 - PS417_12400 0.84 -0.3
Or see this region's nucleotide sequence