Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_10630 and PS417_10635 are separated by 397 nucleotides PS417_10635 and PS417_10640 are separated by 12 nucleotides PS417_10640 and PS417_10645 are separated by 421 nucleotides
PS417_10630: PS417_10630 - hydratase, at 2,268,160 to 2,269,047
_10630
PS417_10635: PS417_10635 - peptidylprolyl isomerase, at 2,269,445 to 2,269,789
_10635
PS417_10640: PS417_10640 - GNAT family acetyltransferase, at 2,269,802 to 2,270,404
_10640
PS417_10645: PS417_10645 - magnesium ABC transporter ATPase, at 2,270,826 to 2,273,531
_10645
Position (kb)
2269
2270
2271 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2268.806 kb on - strand, within PS417_10630 at 2268.882 kb on - strand, within PS417_10630 at 2269.061 kb on + strand at 2269.061 kb on + strand at 2269.061 kb on + strand at 2269.061 kb on + strand at 2269.061 kb on + strand at 2269.062 kb on - strand at 2269.062 kb on - strand at 2269.067 kb on + strand at 2269.070 kb on - strand at 2269.094 kb on + strand at 2269.096 kb on + strand at 2269.096 kb on + strand at 2269.116 kb on - strand at 2269.116 kb on - strand at 2269.147 kb on + strand at 2269.148 kb on - strand at 2269.161 kb on + strand at 2269.161 kb on + strand at 2269.176 kb on + strand at 2269.177 kb on - strand at 2269.228 kb on + strand at 2269.231 kb on + strand at 2269.231 kb on + strand at 2269.231 kb on + strand at 2269.232 kb on - strand at 2269.317 kb on + strand at 2269.317 kb on + strand at 2269.529 kb on + strand, within PS417_10635 at 2269.530 kb on - strand, within PS417_10635 at 2269.665 kb on + strand, within PS417_10635 at 2269.665 kb on + strand, within PS417_10635 at 2269.666 kb on - strand, within PS417_10635 at 2269.666 kb on - strand, within PS417_10635 at 2269.669 kb on + strand, within PS417_10635 at 2269.669 kb on + strand, within PS417_10635 at 2269.669 kb on + strand, within PS417_10635 at 2269.670 kb on - strand, within PS417_10635 at 2269.916 kb on + strand at 2269.917 kb on - strand, within PS417_10640 at 2270.012 kb on + strand, within PS417_10640 at 2270.012 kb on + strand, within PS417_10640 at 2270.013 kb on - strand, within PS417_10640 at 2270.262 kb on - strand, within PS417_10640 at 2270.271 kb on + strand at 2270.272 kb on - strand, within PS417_10640 at 2270.360 kb on + strand at 2270.360 kb on + strand at 2270.360 kb on + strand at 2270.361 kb on - strand at 2270.361 kb on - strand at 2270.457 kb on - strand at 2270.477 kb on + strand at 2270.478 kb on - strand at 2270.520 kb on + strand at 2270.520 kb on + strand at 2270.538 kb on + strand at 2270.538 kb on + strand at 2270.539 kb on - strand at 2270.710 kb on + strand at 2270.758 kb on + strand at 2270.761 kb on - strand at 2271.072 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 2,268,806 - PS417_10630 0.73 +0.9 2,268,882 - PS417_10630 0.81 -0.7 2,269,061 + +1.2 2,269,061 + -1.2 2,269,061 + -0.3 2,269,061 + -0.1 2,269,061 + -0.2 2,269,062 - +0.0 2,269,062 - +0.9 2,269,067 + +0.1 2,269,070 - +0.7 2,269,094 + -0.9 2,269,096 + -0.3 2,269,096 + +0.6 2,269,116 - +0.1 2,269,116 - +0.3 2,269,147 + -1.4 2,269,148 - -1.5 2,269,161 + -2.4 2,269,161 + -1.2 2,269,176 + -1.6 2,269,177 - -1.3 2,269,228 + -0.5 2,269,231 + -0.0 2,269,231 + +0.1 2,269,231 + -0.2 2,269,232 - +0.5 2,269,317 + -0.6 2,269,317 + +1.2 2,269,529 + PS417_10635 0.24 -1.5 2,269,530 - PS417_10635 0.25 +0.2 2,269,665 + PS417_10635 0.64 -0.3 2,269,665 + PS417_10635 0.64 +0.5 2,269,666 - PS417_10635 0.64 -0.4 2,269,666 - PS417_10635 0.64 -1.2 2,269,669 + PS417_10635 0.65 +0.2 2,269,669 + PS417_10635 0.65 -1.5 2,269,669 + PS417_10635 0.65 -0.4 2,269,670 - PS417_10635 0.65 -0.4 2,269,916 + -0.8 2,269,917 - PS417_10640 0.19 +1.9 2,270,012 + PS417_10640 0.35 -0.5 2,270,012 + PS417_10640 0.35 -0.5 2,270,013 - PS417_10640 0.35 -0.2 2,270,262 - PS417_10640 0.76 -0.2 2,270,271 + +0.4 2,270,272 - PS417_10640 0.78 -0.4 2,270,360 + +1.6 2,270,360 + -0.4 2,270,360 + -0.5 2,270,361 - -0.4 2,270,361 - -1.2 2,270,457 - -2.8 2,270,477 + -1.8 2,270,478 - -4.3 2,270,520 + +0.9 2,270,520 + -2.8 2,270,538 + -3.5 2,270,538 + -0.6 2,270,539 - +0.2 2,270,710 + -3.3 2,270,758 + -2.3 2,270,761 - -1.7 2,271,072 + -4.6
Or see this region's nucleotide sequence