Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00445 and PS417_00450 are separated by 10 nucleotides PS417_00450 and PS417_00455 are separated by 376 nucleotides PS417_00455 and PS417_00460 are separated by 79 nucleotides PS417_00460 and PS417_00465 are separated by 2 nucleotides
PS417_00445: PS417_00445 - histidine kinase, at 87,428 to 89,215
_00445
PS417_00450: PS417_00450 - chemotaxis protein CheY, at 89,226 to 90,572
_00450
PS417_00455: PS417_00455 - hypothetical protein, at 90,949 to 91,233
_00455
PS417_00460: PS417_00460 - membrane protein, at 91,313 to 91,477
_00460
PS417_00465: PS417_00465 - hypothetical protein, at 91,480 to 91,947
_00465
Position (kb)
89
90
91 Strain fitness (log2 ratio)
-1
0
1 at 88.296 kb on - strand, within PS417_00445 at 88.428 kb on - strand, within PS417_00445 at 88.428 kb on - strand, within PS417_00445 at 88.962 kb on + strand, within PS417_00445 at 88.962 kb on + strand, within PS417_00445 at 88.963 kb on - strand at 89.068 kb on + strand at 89.173 kb on + strand at 89.174 kb on - strand at 89.216 kb on - strand at 89.216 kb on - strand at 89.220 kb on + strand at 89.220 kb on + strand at 89.221 kb on - strand at 89.221 kb on - strand at 89.221 kb on - strand at 89.236 kb on + strand at 89.237 kb on - strand at 89.319 kb on + strand at 89.469 kb on - strand, within PS417_00450 at 89.501 kb on - strand, within PS417_00450 at 89.554 kb on + strand, within PS417_00450 at 89.554 kb on + strand, within PS417_00450 at 89.555 kb on - strand, within PS417_00450 at 90.153 kb on + strand, within PS417_00450 at 90.154 kb on - strand, within PS417_00450 at 90.324 kb on + strand, within PS417_00450 at 90.475 kb on + strand at 90.475 kb on + strand at 90.475 kb on + strand at 90.476 kb on - strand at 90.535 kb on - strand at 90.589 kb on - strand at 90.594 kb on - strand at 90.594 kb on - strand at 90.610 kb on - strand at 90.643 kb on - strand at 90.675 kb on + strand at 90.675 kb on + strand at 90.676 kb on - strand at 90.676 kb on - strand at 90.676 kb on - strand at 90.692 kb on - strand at 90.729 kb on + strand at 90.730 kb on - strand at 90.908 kb on + strand at 90.908 kb on + strand at 90.909 kb on - strand at 90.925 kb on - strand at 90.981 kb on - strand, within PS417_00455 at 91.143 kb on - strand, within PS417_00455 at 91.143 kb on - strand, within PS417_00455 at 91.231 kb on + strand at 91.232 kb on - strand at 91.274 kb on - strand at 91.283 kb on - strand at 91.289 kb on + strand at 91.289 kb on + strand at 91.300 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 88,296 - PS417_00445 0.49 -0.4 88,428 - PS417_00445 0.56 -0.2 88,428 - PS417_00445 0.56 -0.7 88,962 + PS417_00445 0.86 -0.4 88,962 + PS417_00445 0.86 -0.1 88,963 - -0.9 89,068 + +0.0 89,173 + -1.4 89,174 - +0.8 89,216 - -0.2 89,216 - +0.1 89,220 + +0.4 89,220 + -0.2 89,221 - +0.3 89,221 - -0.4 89,221 - +0.9 89,236 + +0.4 89,237 - +0.8 89,319 + -0.5 89,469 - PS417_00450 0.18 +0.1 89,501 - PS417_00450 0.20 -0.6 89,554 + PS417_00450 0.24 -0.4 89,554 + PS417_00450 0.24 -0.5 89,555 - PS417_00450 0.24 +1.7 90,153 + PS417_00450 0.69 -0.2 90,154 - PS417_00450 0.69 -0.3 90,324 + PS417_00450 0.82 +0.6 90,475 + +0.4 90,475 + +1.4 90,475 + +0.4 90,476 - +0.0 90,535 - -0.4 90,589 - +0.3 90,594 - +1.2 90,594 - -0.1 90,610 - +0.6 90,643 - +0.7 90,675 + -0.1 90,675 + +0.4 90,676 - -1.0 90,676 - -0.7 90,676 - -0.1 90,692 - +0.4 90,729 + +0.8 90,730 - -0.0 90,908 + +1.4 90,908 + +0.6 90,909 - +0.3 90,925 - -0.1 90,981 - PS417_00455 0.11 +1.6 91,143 - PS417_00455 0.68 +0.8 91,143 - PS417_00455 0.68 -0.1 91,231 + +0.0 91,232 - +0.8 91,274 - +0.3 91,283 - -0.4 91,289 + -0.2 91,289 + +1.2 91,300 - -0.5
Or see this region's nucleotide sequence