Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19200 and PS417_19205 overlap by 4 nucleotides PS417_19205 and PS417_19210 are separated by 130 nucleotides
PS417_19200: PS417_19200 - fumarate hydratase, at 4,160,187 to 4,161,569
_19200
PS417_19205: PS417_19205 - membrane protein, at 4,161,566 to 4,162,522
_19205
PS417_19210: PS417_19210 - acetyl-CoA acetyltransferase, at 4,162,653 to 4,163,837
_19210
Position (kb)
4161
4162
4163 Strain fitness (log2 ratio)
-1
0
1 at 4160.744 kb on + strand, within PS417_19200 at 4161.262 kb on - strand, within PS417_19200 at 4161.465 kb on + strand at 4161.510 kb on + strand at 4161.554 kb on + strand at 4161.554 kb on + strand at 4161.554 kb on + strand at 4161.699 kb on + strand, within PS417_19205 at 4161.700 kb on - strand, within PS417_19205 at 4161.832 kb on + strand, within PS417_19205 at 4161.933 kb on + strand, within PS417_19205 at 4161.934 kb on - strand, within PS417_19205 at 4161.934 kb on - strand, within PS417_19205 at 4161.996 kb on + strand, within PS417_19205 at 4161.997 kb on - strand, within PS417_19205 at 4162.010 kb on - strand, within PS417_19205 at 4162.047 kb on + strand, within PS417_19205 at 4162.130 kb on + strand, within PS417_19205 at 4162.130 kb on + strand, within PS417_19205 at 4162.251 kb on + strand, within PS417_19205 at 4162.251 kb on + strand, within PS417_19205 at 4162.251 kb on + strand, within PS417_19205 at 4162.252 kb on - strand, within PS417_19205 at 4162.260 kb on + strand, within PS417_19205 at 4162.260 kb on + strand, within PS417_19205 at 4162.560 kb on + strand at 4162.601 kb on + strand at 4162.730 kb on + strand at 4162.730 kb on + strand at 4162.825 kb on + strand, within PS417_19210 at 4163.248 kb on + strand, within PS417_19210 at 4163.248 kb on + strand, within PS417_19210 at 4163.248 kb on + strand, within PS417_19210 at 4163.249 kb on - strand, within PS417_19210 at 4163.332 kb on + strand, within PS417_19210 at 4163.332 kb on + strand, within PS417_19210 at 4163.332 kb on + strand, within PS417_19210 at 4163.332 kb on + strand, within PS417_19210 at 4163.333 kb on - strand, within PS417_19210 at 4163.333 kb on - strand, within PS417_19210 at 4163.333 kb on - strand, within PS417_19210 at 4163.333 kb on - strand, within PS417_19210 at 4163.333 kb on - strand, within PS417_19210 at 4163.405 kb on - strand, within PS417_19210
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 4,160,744 + PS417_19200 0.40 -0.5 4,161,262 - PS417_19200 0.78 +0.5 4,161,465 + +0.2 4,161,510 + +0.4 4,161,554 + +0.4 4,161,554 + +0.1 4,161,554 + -0.4 4,161,699 + PS417_19205 0.14 -0.2 4,161,700 - PS417_19205 0.14 -0.5 4,161,832 + PS417_19205 0.28 -1.6 4,161,933 + PS417_19205 0.38 -0.5 4,161,934 - PS417_19205 0.38 -1.7 4,161,934 - PS417_19205 0.38 -0.3 4,161,996 + PS417_19205 0.45 -0.7 4,161,997 - PS417_19205 0.45 +0.3 4,162,010 - PS417_19205 0.46 -0.9 4,162,047 + PS417_19205 0.50 -0.7 4,162,130 + PS417_19205 0.59 -0.2 4,162,130 + PS417_19205 0.59 -0.0 4,162,251 + PS417_19205 0.72 -0.1 4,162,251 + PS417_19205 0.72 -1.0 4,162,251 + PS417_19205 0.72 +0.2 4,162,252 - PS417_19205 0.72 -0.3 4,162,260 + PS417_19205 0.73 -0.5 4,162,260 + PS417_19205 0.73 -0.1 4,162,560 + -0.5 4,162,601 + -0.3 4,162,730 + +0.1 4,162,730 + +0.5 4,162,825 + PS417_19210 0.15 -0.3 4,163,248 + PS417_19210 0.50 +0.1 4,163,248 + PS417_19210 0.50 -0.3 4,163,248 + PS417_19210 0.50 -0.3 4,163,249 - PS417_19210 0.50 +0.6 4,163,332 + PS417_19210 0.57 +1.0 4,163,332 + PS417_19210 0.57 +0.0 4,163,332 + PS417_19210 0.57 +0.0 4,163,332 + PS417_19210 0.57 +0.6 4,163,333 - PS417_19210 0.57 -0.2 4,163,333 - PS417_19210 0.57 -0.4 4,163,333 - PS417_19210 0.57 -0.8 4,163,333 - PS417_19210 0.57 -1.2 4,163,333 - PS417_19210 0.57 -0.6 4,163,405 - PS417_19210 0.63 +0.2
Or see this region's nucleotide sequence