Experiment: Fraxetin 1 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00640 and PS417_00645 are separated by 99 nucleotides PS417_00645 and PS417_00650 are separated by 52 nucleotides PS417_00650 and PS417_00655 are separated by 102 nucleotides
PS417_00640: PS417_00640 - ABC transporter permease, at 131,045 to 131,893
_00640
PS417_00645: PS417_00645 - hypothetical protein, at 131,993 to 132,619
_00645
PS417_00650: PS417_00650 - LysR family transcriptional regulator, at 132,672 to 133,592
_00650
PS417_00655: PS417_00655 - DSBA oxidoreductase, at 133,695 to 135,230
_00655
Position (kb)
132
133
134 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 131.747 kb on + strand, within PS417_00640 at 131.747 kb on + strand, within PS417_00640 at 131.748 kb on - strand, within PS417_00640 at 131.748 kb on - strand, within PS417_00640 at 131.748 kb on - strand, within PS417_00640 at 131.774 kb on + strand, within PS417_00640 at 131.774 kb on + strand, within PS417_00640 at 131.775 kb on - strand, within PS417_00640 at 131.775 kb on - strand, within PS417_00640 at 131.775 kb on - strand, within PS417_00640 at 131.987 kb on - strand at 132.024 kb on + strand at 132.024 kb on + strand at 132.136 kb on + strand, within PS417_00645 at 132.136 kb on + strand, within PS417_00645 at 132.152 kb on - strand, within PS417_00645 at 132.290 kb on - strand, within PS417_00645 at 132.353 kb on + strand, within PS417_00645 at 132.353 kb on + strand, within PS417_00645 at 132.353 kb on + strand, within PS417_00645 at 132.354 kb on - strand, within PS417_00645 at 132.482 kb on - strand, within PS417_00645 at 132.550 kb on + strand, within PS417_00645 at 132.550 kb on + strand, within PS417_00645 at 132.579 kb on - strand at 132.588 kb on - strand at 132.618 kb on - strand at 133.242 kb on + strand, within PS417_00650 at 133.612 kb on + strand at 133.613 kb on - strand at 133.669 kb on + strand at 133.760 kb on - strand at 133.760 kb on - strand at 133.872 kb on + strand, within PS417_00655 at 133.872 kb on + strand, within PS417_00655 at 133.873 kb on - strand, within PS417_00655 at 133.876 kb on + strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 133.877 kb on - strand, within PS417_00655 at 134.044 kb on - strand, within PS417_00655 at 134.044 kb on - strand, within PS417_00655 at 134.152 kb on - strand, within PS417_00655 at 134.218 kb on + strand, within PS417_00655 at 134.229 kb on + strand, within PS417_00655 at 134.230 kb on - strand, within PS417_00655
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; solid stress remove 131,747 + PS417_00640 0.83 -0.7 131,747 + PS417_00640 0.83 -0.0 131,748 - PS417_00640 0.83 +0.0 131,748 - PS417_00640 0.83 -0.1 131,748 - PS417_00640 0.83 +0.1 131,774 + PS417_00640 0.86 -0.4 131,774 + PS417_00640 0.86 -0.1 131,775 - PS417_00640 0.86 +0.1 131,775 - PS417_00640 0.86 -0.2 131,775 - PS417_00640 0.86 +0.3 131,987 - +1.5 132,024 + +0.1 132,024 + -0.4 132,136 + PS417_00645 0.23 +1.0 132,136 + PS417_00645 0.23 -0.1 132,152 - PS417_00645 0.25 +0.2 132,290 - PS417_00645 0.47 +0.7 132,353 + PS417_00645 0.57 +1.1 132,353 + PS417_00645 0.57 -0.1 132,353 + PS417_00645 0.57 -0.6 132,354 - PS417_00645 0.58 +0.5 132,482 - PS417_00645 0.78 -0.2 132,550 + PS417_00645 0.89 -0.5 132,550 + PS417_00645 0.89 -0.3 132,579 - +1.7 132,588 - +2.3 132,618 - +1.1 133,242 + PS417_00650 0.62 -1.0 133,612 + -2.1 133,613 - -1.8 133,669 + -1.2 133,760 - -1.6 133,760 - -0.9 133,872 + PS417_00655 0.12 -0.7 133,872 + PS417_00655 0.12 -0.5 133,873 - PS417_00655 0.12 -1.0 133,876 + PS417_00655 0.12 -2.4 133,877 - PS417_00655 0.12 -2.9 133,877 - PS417_00655 0.12 -1.1 133,877 - PS417_00655 0.12 -1.8 133,877 - PS417_00655 0.12 -0.9 134,044 - PS417_00655 0.23 -0.5 134,044 - PS417_00655 0.23 -1.8 134,152 - PS417_00655 0.30 -0.4 134,218 + PS417_00655 0.34 -2.2 134,229 + PS417_00655 0.35 -1.2 134,230 - PS417_00655 0.35 -1.7
Or see this region's nucleotide sequence