Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09420 and PS417_09425 are separated by 57 nucleotides PS417_09425 and PS417_09430 are separated by 100 nucleotides
PS417_09420: PS417_09420 - LysR family transcriptional regulator, at 2,041,154 to 2,042,089
_09420
PS417_09425: PS417_09425 - C4-dicarboxylate transporter, at 2,042,147 to 2,043,460
_09425
PS417_09430: PS417_09430 - alpha/beta hydrolase, at 2,043,561 to 2,044,436
_09430
Position (kb)
2042
2043
2044 Strain fitness (log2 ratio)
-2
-1
0
1 at 2041.536 kb on + strand, within PS417_09420 at 2041.537 kb on - strand, within PS417_09420 at 2041.537 kb on - strand, within PS417_09420 at 2041.674 kb on - strand, within PS417_09420 at 2042.148 kb on + strand at 2042.293 kb on + strand, within PS417_09425 at 2042.293 kb on + strand, within PS417_09425 at 2042.293 kb on + strand, within PS417_09425 at 2042.293 kb on + strand, within PS417_09425 at 2042.294 kb on - strand, within PS417_09425 at 2042.530 kb on + strand, within PS417_09425 at 2042.532 kb on + strand, within PS417_09425 at 2042.532 kb on + strand, within PS417_09425 at 2042.532 kb on + strand, within PS417_09425 at 2042.532 kb on + strand, within PS417_09425 at 2042.532 kb on + strand, within PS417_09425 at 2042.532 kb on + strand, within PS417_09425 at 2042.533 kb on - strand, within PS417_09425 at 2042.533 kb on - strand, within PS417_09425 at 2042.533 kb on - strand, within PS417_09425 at 2042.533 kb on - strand, within PS417_09425 at 2042.533 kb on - strand, within PS417_09425 at 2042.533 kb on - strand, within PS417_09425 at 2042.562 kb on + strand, within PS417_09425 at 2042.691 kb on + strand, within PS417_09425 at 2042.692 kb on - strand, within PS417_09425 at 2042.756 kb on - strand at 2042.775 kb on + strand, within PS417_09425 at 2042.776 kb on - strand, within PS417_09425 at 2042.776 kb on - strand, within PS417_09425 at 2042.823 kb on + strand, within PS417_09425 at 2042.828 kb on - strand, within PS417_09425 at 2043.219 kb on + strand, within PS417_09425 at 2043.257 kb on + strand, within PS417_09425 at 2043.258 kb on - strand, within PS417_09425 at 2043.258 kb on - strand, within PS417_09425 at 2043.428 kb on - strand at 2043.429 kb on + strand at 2043.430 kb on - strand at 2043.430 kb on - strand at 2043.430 kb on - strand at 2043.468 kb on - strand at 2043.468 kb on - strand at 2043.551 kb on - strand at 2043.619 kb on + strand at 2043.619 kb on + strand at 2043.620 kb on - strand at 2043.620 kb on - strand at 2043.620 kb on - strand at 2043.879 kb on - strand, within PS417_09430 at 2044.030 kb on + strand, within PS417_09430 at 2044.030 kb on + strand, within PS417_09430 at 2044.207 kb on + strand, within PS417_09430 at 2044.208 kb on - strand, within PS417_09430
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 2,041,536 + PS417_09420 0.41 -1.6 2,041,537 - PS417_09420 0.41 -0.7 2,041,537 - PS417_09420 0.41 +1.3 2,041,674 - PS417_09420 0.56 +0.3 2,042,148 + +0.0 2,042,293 + PS417_09425 0.11 +0.2 2,042,293 + PS417_09425 0.11 -1.3 2,042,293 + PS417_09425 0.11 -0.1 2,042,293 + PS417_09425 0.11 +0.0 2,042,294 - PS417_09425 0.11 -0.7 2,042,530 + PS417_09425 0.29 -0.0 2,042,532 + PS417_09425 0.29 -0.4 2,042,532 + PS417_09425 0.29 -2.2 2,042,532 + PS417_09425 0.29 +0.3 2,042,532 + PS417_09425 0.29 -1.0 2,042,532 + PS417_09425 0.29 -0.0 2,042,532 + PS417_09425 0.29 -0.8 2,042,533 - PS417_09425 0.29 +0.2 2,042,533 - PS417_09425 0.29 -0.0 2,042,533 - PS417_09425 0.29 -0.4 2,042,533 - PS417_09425 0.29 -0.5 2,042,533 - PS417_09425 0.29 +0.3 2,042,533 - PS417_09425 0.29 -0.9 2,042,562 + PS417_09425 0.32 -0.1 2,042,691 + PS417_09425 0.41 -1.5 2,042,692 - PS417_09425 0.41 -0.5 2,042,756 - +1.4 2,042,775 + PS417_09425 0.48 -0.5 2,042,776 - PS417_09425 0.48 -0.5 2,042,776 - PS417_09425 0.48 +0.1 2,042,823 + PS417_09425 0.51 -0.2 2,042,828 - PS417_09425 0.52 +0.4 2,043,219 + PS417_09425 0.82 -0.7 2,043,257 + PS417_09425 0.84 -0.6 2,043,258 - PS417_09425 0.85 +0.4 2,043,258 - PS417_09425 0.85 -0.1 2,043,428 - -0.4 2,043,429 + +0.1 2,043,430 - +0.1 2,043,430 - -0.2 2,043,430 - +0.6 2,043,468 - +0.0 2,043,468 - -0.4 2,043,551 - -0.2 2,043,619 + +0.5 2,043,619 + +0.1 2,043,620 - -0.1 2,043,620 - +0.4 2,043,620 - -0.6 2,043,879 - PS417_09430 0.36 -0.0 2,044,030 + PS417_09430 0.54 -0.8 2,044,030 + PS417_09430 0.54 -0.1 2,044,207 + PS417_09430 0.74 -0.4 2,044,208 - PS417_09430 0.74 -0.2
Or see this region's nucleotide sequence