Experiment: Scopoletin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_05985 and PS417_05990 are separated by 51 nucleotides PS417_05990 and PS417_06000 are separated by 453 nucleotides
PS417_05985: PS417_05985 - chemotaxis protein CheY, at 1,331,450 to 1,332,460
_05985
PS417_05990: PS417_05990 - diguanylate cyclase, at 1,332,512 to 1,333,513
_05990
PS417_06000: PS417_06000 - peptide chain release factor 2, at 1,333,967 to 1,334,848
_06000
Position (kb)
1332
1333
1334 Strain fitness (log2 ratio)
-2
-1
0
1 at 1331.752 kb on - strand, within PS417_05985 at 1332.168 kb on - strand, within PS417_05985 at 1332.262 kb on - strand, within PS417_05985 at 1332.307 kb on - strand, within PS417_05985 at 1332.495 kb on - strand at 1332.920 kb on + strand, within PS417_05990 at 1332.991 kb on + strand, within PS417_05990 at 1333.064 kb on + strand, within PS417_05990 at 1333.148 kb on + strand, within PS417_05990 at 1333.149 kb on - strand, within PS417_05990 at 1333.149 kb on - strand, within PS417_05990 at 1333.357 kb on + strand, within PS417_05990 at 1333.357 kb on + strand, within PS417_05990 at 1333.469 kb on + strand at 1333.469 kb on + strand at 1333.469 kb on + strand at 1333.469 kb on + strand at 1333.469 kb on + strand at 1333.469 kb on + strand at 1333.470 kb on - strand at 1333.470 kb on - strand at 1333.470 kb on - strand at 1333.470 kb on - strand at 1333.483 kb on + strand at 1333.578 kb on + strand at 1333.578 kb on + strand at 1333.578 kb on + strand at 1333.578 kb on + strand at 1333.579 kb on - strand at 1333.579 kb on - strand at 1333.643 kb on + strand at 1333.655 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 2 mM; solid stress remove 1,331,752 - PS417_05985 0.30 +0.5 1,332,168 - PS417_05985 0.71 +1.4 1,332,262 - PS417_05985 0.80 -0.4 1,332,307 - PS417_05985 0.85 -0.4 1,332,495 - -0.0 1,332,920 + PS417_05990 0.41 -0.1 1,332,991 + PS417_05990 0.48 +1.0 1,333,064 + PS417_05990 0.55 -2.5 1,333,148 + PS417_05990 0.63 +0.2 1,333,149 - PS417_05990 0.64 +1.7 1,333,149 - PS417_05990 0.64 +0.5 1,333,357 + PS417_05990 0.84 +0.3 1,333,357 + PS417_05990 0.84 +1.0 1,333,469 + -1.3 1,333,469 + -0.1 1,333,469 + -0.6 1,333,469 + -1.2 1,333,469 + +0.1 1,333,469 + -0.5 1,333,470 - -0.9 1,333,470 - +0.3 1,333,470 - -0.1 1,333,470 - -0.1 1,333,483 + +0.5 1,333,578 + +0.2 1,333,578 + -0.2 1,333,578 + +0.7 1,333,578 + +0.3 1,333,579 - -0.5 1,333,579 - +1.7 1,333,643 + -0.4 1,333,655 - +0.2
Or see this region's nucleotide sequence