Experiment: 80% Methanol 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16970 and PS417_16975 are separated by 64 nucleotides PS417_16975 and PS417_16980 are separated by 168 nucleotides
PS417_16970: PS417_16970 - membrane protein, at 3,706,325 to 3,708,052
_16970
PS417_16975: PS417_16975 - GNAT family acetyltransferase, at 3,708,117 to 3,708,767
_16975
PS417_16980: PS417_16980 - exonuclease III, at 3,708,936 to 3,709,748
_16980
Position (kb)
3708
3709 Strain fitness (log2 ratio)
-1
0
1 at 3707.164 kb on - strand, within PS417_16970 at 3707.508 kb on + strand, within PS417_16970 at 3707.831 kb on + strand, within PS417_16970 at 3707.832 kb on - strand, within PS417_16970 at 3708.032 kb on - strand at 3708.065 kb on + strand at 3708.066 kb on - strand at 3708.115 kb on + strand at 3708.115 kb on + strand at 3708.116 kb on - strand at 3708.118 kb on + strand at 3708.118 kb on + strand at 3708.118 kb on + strand at 3708.135 kb on + strand at 3708.223 kb on + strand, within PS417_16975 at 3708.223 kb on + strand, within PS417_16975 at 3708.224 kb on - strand, within PS417_16975 at 3708.224 kb on - strand, within PS417_16975 at 3708.629 kb on - strand, within PS417_16975 at 3708.689 kb on - strand, within PS417_16975 at 3708.809 kb on + strand at 3708.822 kb on + strand at 3708.823 kb on - strand at 3708.850 kb on - strand at 3708.900 kb on + strand at 3709.076 kb on - strand, within PS417_16980 at 3709.076 kb on - strand, within PS417_16980 at 3709.101 kb on + strand, within PS417_16980 at 3709.102 kb on - strand, within PS417_16980 at 3709.102 kb on - strand, within PS417_16980 at 3709.102 kb on - strand, within PS417_16980 at 3709.209 kb on - strand, within PS417_16980 at 3709.209 kb on - strand at 3709.323 kb on + strand, within PS417_16980
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; solid stress remove 3,707,164 - PS417_16970 0.49 -0.4 3,707,508 + PS417_16970 0.68 -0.6 3,707,831 + PS417_16970 0.87 -0.3 3,707,832 - PS417_16970 0.87 -0.0 3,708,032 - -0.7 3,708,065 + +0.4 3,708,066 - -1.2 3,708,115 + -0.0 3,708,115 + -0.2 3,708,116 - +0.1 3,708,118 + -0.1 3,708,118 + -0.5 3,708,118 + +0.1 3,708,135 + -1.1 3,708,223 + PS417_16975 0.16 +0.5 3,708,223 + PS417_16975 0.16 -0.1 3,708,224 - PS417_16975 0.16 +1.5 3,708,224 - PS417_16975 0.16 +0.3 3,708,629 - PS417_16975 0.79 -0.5 3,708,689 - PS417_16975 0.88 +1.2 3,708,809 + +0.4 3,708,822 + -0.3 3,708,823 - -0.7 3,708,850 - +0.6 3,708,900 + -0.4 3,709,076 - PS417_16980 0.17 +0.3 3,709,076 - PS417_16980 0.17 +0.4 3,709,101 + PS417_16980 0.20 +0.0 3,709,102 - PS417_16980 0.20 +0.3 3,709,102 - PS417_16980 0.20 +0.2 3,709,102 - PS417_16980 0.20 -0.1 3,709,209 - PS417_16980 0.34 -0.1 3,709,209 - +0.4 3,709,323 + PS417_16980 0.48 -0.1
Or see this region's nucleotide sequence