Experiment: 80% Methanol 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00090 and PS417_00095 are separated by 69 nucleotides PS417_00095 and PS417_00100 are separated by 135 nucleotides
PS417_00090: PS417_00090 - methionyl-tRNA formyltransferase, at 20,029 to 20,982
_00090
PS417_00095: PS417_00095 - peptide deformylase, at 21,052 to 21,558
_00095
PS417_00100: PS417_00100 - peptidoglycan-binding protein, at 21,694 to 22,470
_00100
Position (kb)
21
22
23 Strain fitness (log2 ratio)
-1
0
1 at 20.997 kb on - strand at 21.565 kb on - strand at 21.565 kb on - strand at 21.565 kb on - strand at 21.565 kb on - strand at 21.585 kb on - strand at 21.675 kb on - strand at 21.678 kb on - strand at 21.678 kb on - strand at 21.678 kb on - strand at 21.720 kb on - strand at 21.720 kb on - strand at 21.856 kb on + strand, within PS417_00100 at 21.856 kb on + strand, within PS417_00100 at 21.857 kb on - strand, within PS417_00100 at 21.857 kb on - strand, within PS417_00100 at 21.857 kb on - strand, within PS417_00100 at 21.953 kb on + strand, within PS417_00100 at 21.973 kb on + strand, within PS417_00100 at 21.998 kb on + strand, within PS417_00100 at 21.998 kb on + strand, within PS417_00100 at 21.998 kb on + strand, within PS417_00100 at 21.999 kb on - strand, within PS417_00100 at 22.170 kb on + strand, within PS417_00100 at 22.382 kb on - strand, within PS417_00100 at 22.468 kb on + strand at 22.468 kb on + strand at 22.473 kb on - strand at 22.473 kb on - strand at 22.481 kb on - strand at 22.484 kb on + strand at 22.484 kb on + strand at 22.863 kb on - strand at 23.317 kb on + strand at 23.318 kb on - strand at 23.318 kb on - strand at 23.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; solid stress remove 20,997 - -0.4 21,565 - -0.6 21,565 - +0.6 21,565 - -0.5 21,565 - -0.3 21,585 - -0.3 21,675 - +0.3 21,678 - +0.8 21,678 - +0.2 21,678 - -0.1 21,720 - -0.5 21,720 - +0.9 21,856 + PS417_00100 0.21 +0.8 21,856 + PS417_00100 0.21 -0.4 21,857 - PS417_00100 0.21 +0.1 21,857 - PS417_00100 0.21 +1.3 21,857 - PS417_00100 0.21 +0.7 21,953 + PS417_00100 0.33 +0.9 21,973 + PS417_00100 0.36 +0.4 21,998 + PS417_00100 0.39 -0.1 21,998 + PS417_00100 0.39 -0.0 21,998 + PS417_00100 0.39 -0.1 21,999 - PS417_00100 0.39 +0.4 22,170 + PS417_00100 0.61 +0.4 22,382 - PS417_00100 0.89 +0.1 22,468 + -0.1 22,468 + +0.3 22,473 - -0.2 22,473 - -1.0 22,481 - +0.2 22,484 + -1.2 22,484 + +0.0 22,863 - -0.0 23,317 + +1.2 23,318 - -0.5 23,318 - -0.9 23,401 - -0.0
Or see this region's nucleotide sequence