Experiment: 80% Methanol 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09020 and PS417_09025 are separated by 97 nucleotides PS417_09025 and PS417_09030 overlap by 4 nucleotides PS417_09030 and PS417_09035 are separated by 102 nucleotides PS417_09035 and PS417_09040 are separated by 72 nucleotides
PS417_09020: PS417_09020 - esterase, at 1,964,678 to 1,965,121
_09020
PS417_09025: PS417_09025 - alpha/beta hydrolase, at 1,965,219 to 1,966,022
_09025
PS417_09030: PS417_09030 - alpha/beta hydrolase, at 1,966,019 to 1,966,873
_09030
PS417_09035: PS417_09035 - hypothetical protein, at 1,966,976 to 1,967,794
_09035
PS417_09040: PS417_09040 - hypothetical protein, at 1,967,867 to 1,968,928
_09040
Position (kb)
1966
1967 Strain fitness (log2 ratio)
-1
0
1 at 1965.153 kb on + strand at 1965.153 kb on + strand at 1965.154 kb on - strand at 1965.154 kb on - strand at 1965.154 kb on - strand at 1965.154 kb on - strand at 1965.271 kb on - strand at 1965.305 kb on + strand, within PS417_09025 at 1965.305 kb on + strand, within PS417_09025 at 1965.306 kb on - strand, within PS417_09025 at 1965.360 kb on - strand, within PS417_09025 at 1965.486 kb on + strand, within PS417_09025 at 1965.646 kb on - strand, within PS417_09025 at 1965.646 kb on - strand, within PS417_09025 at 1965.700 kb on - strand, within PS417_09025 at 1965.700 kb on - strand, within PS417_09025 at 1965.717 kb on + strand, within PS417_09025 at 1965.718 kb on - strand, within PS417_09025 at 1965.775 kb on - strand, within PS417_09025 at 1966.229 kb on - strand, within PS417_09030 at 1966.229 kb on - strand, within PS417_09030 at 1966.256 kb on + strand, within PS417_09030 at 1966.262 kb on + strand, within PS417_09030 at 1966.312 kb on - strand, within PS417_09030 at 1966.496 kb on + strand, within PS417_09030 at 1966.497 kb on - strand, within PS417_09030 at 1966.497 kb on - strand, within PS417_09030 at 1966.498 kb on + strand, within PS417_09030 at 1966.692 kb on + strand, within PS417_09030 at 1966.975 kb on + strand at 1966.975 kb on + strand at 1966.976 kb on - strand at 1966.997 kb on - strand at 1967.134 kb on + strand, within PS417_09035 at 1967.135 kb on - strand, within PS417_09035 at 1967.138 kb on + strand, within PS417_09035 at 1967.226 kb on - strand, within PS417_09035 at 1967.496 kb on + strand, within PS417_09035 at 1967.798 kb on + strand at 1967.830 kb on - strand at 1967.842 kb on + strand at 1967.842 kb on + strand at 1967.864 kb on + strand at 1967.864 kb on + strand at 1967.865 kb on - strand at 1967.865 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; solid stress remove 1,965,153 + -0.6 1,965,153 + -1.0 1,965,154 - -0.6 1,965,154 - +0.0 1,965,154 - +0.4 1,965,154 - -0.4 1,965,271 - +0.7 1,965,305 + PS417_09025 0.11 +0.3 1,965,305 + PS417_09025 0.11 -0.2 1,965,306 - PS417_09025 0.11 +0.6 1,965,360 - PS417_09025 0.18 -0.5 1,965,486 + PS417_09025 0.33 +0.1 1,965,646 - PS417_09025 0.53 -0.2 1,965,646 - PS417_09025 0.53 -0.0 1,965,700 - PS417_09025 0.60 +0.8 1,965,700 - PS417_09025 0.60 -0.2 1,965,717 + PS417_09025 0.62 +1.1 1,965,718 - PS417_09025 0.62 -0.2 1,965,775 - PS417_09025 0.69 -0.2 1,966,229 - PS417_09030 0.25 +0.3 1,966,229 - PS417_09030 0.25 +0.3 1,966,256 + PS417_09030 0.28 +0.1 1,966,262 + PS417_09030 0.28 +0.5 1,966,312 - PS417_09030 0.34 +1.1 1,966,496 + PS417_09030 0.56 +0.1 1,966,497 - PS417_09030 0.56 -0.2 1,966,497 - PS417_09030 0.56 -0.0 1,966,498 + PS417_09030 0.56 -0.1 1,966,692 + PS417_09030 0.79 +0.5 1,966,975 + +0.2 1,966,975 + +1.1 1,966,976 - +1.2 1,966,997 - -1.5 1,967,134 + PS417_09035 0.19 -0.7 1,967,135 - PS417_09035 0.19 +0.1 1,967,138 + PS417_09035 0.20 +0.3 1,967,226 - PS417_09035 0.31 +0.3 1,967,496 + PS417_09035 0.63 +0.0 1,967,798 + -0.1 1,967,830 - +0.0 1,967,842 + +0.1 1,967,842 + +0.3 1,967,864 + +1.0 1,967,864 + -0.3 1,967,865 - +0.3 1,967,865 - +0.9
Or see this region's nucleotide sequence