Experiment: 80% Methanol 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07530 and PS417_07535 are separated by 140 nucleotides PS417_07535 and PS417_07540 are separated by 53 nucleotides PS417_07540 and PS417_07545 are separated by 267 nucleotides
PS417_07530: PS417_07530 - multidrug transporter, at 1,655,733 to 1,657,127
_07530
PS417_07535: PS417_07535 - erythronate-4-phosphate dehydrogenase, at 1,657,268 to 1,658,410
_07535
PS417_07540: PS417_07540 - multifunctional fatty acid oxidation complex subunit alpha, at 1,658,464 to 1,658,637
_07540
PS417_07545: PS417_07545 - ABC transporter ATP-binding protein, at 1,658,905 to 1,660,680
_07545
Position (kb)
1657
1658
1659 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1656.387 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.430 kb on + strand, within PS417_07530 at 1656.430 kb on + strand, within PS417_07530 at 1656.430 kb on + strand at 1656.430 kb on + strand, within PS417_07530 at 1656.448 kb on + strand, within PS417_07530 at 1656.562 kb on + strand, within PS417_07530 at 1656.574 kb on + strand at 1656.667 kb on + strand, within PS417_07530 at 1656.667 kb on + strand, within PS417_07530 at 1656.668 kb on - strand, within PS417_07530 at 1656.670 kb on + strand, within PS417_07530 at 1656.671 kb on - strand, within PS417_07530 at 1656.713 kb on - strand at 1656.926 kb on - strand, within PS417_07530 at 1657.129 kb on + strand at 1657.130 kb on - strand at 1657.130 kb on - strand at 1657.130 kb on - strand at 1657.142 kb on + strand at 1657.143 kb on - strand at 1657.170 kb on + strand at 1658.566 kb on - strand, within PS417_07540 at 1658.567 kb on + strand, within PS417_07540 at 1658.567 kb on + strand, within PS417_07540 at 1658.568 kb on - strand, within PS417_07540 at 1658.663 kb on - strand at 1658.663 kb on - strand at 1658.666 kb on + strand at 1658.666 kb on + strand at 1658.666 kb on + strand at 1658.667 kb on - strand at 1658.667 kb on - strand at 1658.667 kb on - strand at 1658.675 kb on + strand at 1658.678 kb on + strand at 1658.678 kb on + strand at 1658.678 kb on + strand at 1658.708 kb on + strand at 1658.709 kb on - strand at 1658.709 kb on - strand at 1658.797 kb on - strand at 1658.819 kb on - strand at 1658.819 kb on - strand at 1658.839 kb on - strand at 1658.839 kb on - strand at 1658.870 kb on - strand at 1658.870 kb on - strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.877 kb on + strand at 1658.878 kb on - strand at 1658.878 kb on - strand at 1658.963 kb on - strand at 1659.016 kb on - strand at 1659.016 kb on - strand at 1659.155 kb on - strand, within PS417_07545 at 1659.155 kb on - strand, within PS417_07545 at 1659.241 kb on + strand at 1659.308 kb on + strand at 1659.339 kb on + strand, within PS417_07545
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; solid stress remove 1,656,387 + PS417_07530 0.47 +0.2 1,656,387 + PS417_07530 0.47 -0.0 1,656,387 + PS417_07530 0.47 +0.2 1,656,430 + PS417_07530 0.50 +1.8 1,656,430 + PS417_07530 0.50 +0.3 1,656,430 + +0.7 1,656,430 + PS417_07530 0.50 +0.5 1,656,448 + PS417_07530 0.51 -0.7 1,656,562 + PS417_07530 0.59 +0.0 1,656,574 + +0.4 1,656,667 + PS417_07530 0.67 +0.1 1,656,667 + PS417_07530 0.67 -0.3 1,656,668 - PS417_07530 0.67 -0.4 1,656,670 + PS417_07530 0.67 +0.4 1,656,671 - PS417_07530 0.67 +1.3 1,656,713 - +1.3 1,656,926 - PS417_07530 0.86 +0.1 1,657,129 + +0.4 1,657,130 - -0.2 1,657,130 - +0.8 1,657,130 - -0.5 1,657,142 + -0.1 1,657,143 - -2.6 1,657,170 + +1.1 1,658,566 - PS417_07540 0.59 -1.0 1,658,567 + PS417_07540 0.59 -0.3 1,658,567 + PS417_07540 0.59 -0.6 1,658,568 - PS417_07540 0.60 -1.0 1,658,663 - +0.0 1,658,663 - -0.6 1,658,666 + -0.0 1,658,666 + +0.3 1,658,666 + +1.1 1,658,667 - -0.0 1,658,667 - +0.1 1,658,667 - -0.7 1,658,675 + +1.5 1,658,678 + -0.3 1,658,678 + +0.1 1,658,678 + +0.8 1,658,708 + -0.4 1,658,709 - -0.3 1,658,709 - +2.1 1,658,797 - -0.4 1,658,819 - +1.0 1,658,819 - +0.2 1,658,839 - +0.6 1,658,839 - -0.3 1,658,870 - -0.7 1,658,870 - -0.4 1,658,877 + +0.7 1,658,877 + -0.7 1,658,877 + +2.5 1,658,877 + +0.5 1,658,877 + +0.5 1,658,878 - +0.3 1,658,878 - -0.4 1,658,963 - -0.2 1,659,016 - +0.0 1,659,016 - -0.4 1,659,155 - PS417_07545 0.14 -0.4 1,659,155 - PS417_07545 0.14 -0.7 1,659,241 + -0.1 1,659,308 + -0.4 1,659,339 + PS417_07545 0.24 -0.8
Or see this region's nucleotide sequence