Experiment: 80% Methanol 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06840 and PS417_06845 are separated by 238 nucleotides PS417_06845 and PS417_06850 are separated by 18 nucleotides PS417_06850 and PS417_06855 are separated by 28 nucleotides PS417_06855 and PS417_06860 are separated by 130 nucleotides
PS417_06840: PS417_06840 - beta-D-glucoside glucohydrolase, at 1,513,027 to 1,515,318
_06840
PS417_06845: PS417_06845 - lipoprotein, at 1,515,557 to 1,516,168
_06845
PS417_06850: PS417_06850 - methanol dehydrogenase, at 1,516,187 to 1,516,915
_06850
PS417_06855: PS417_06855 - membrane protein, at 1,516,944 to 1,517,561
_06855
PS417_06860: PS417_06860 - methyltransferase, at 1,517,692 to 1,518,909
_06860
Position (kb) 1516
1517 Strain fitness (log2 ratio) -2
-1
0
1 at 1515.352 kb on - strand at 1515.352 kb on - strand at 1515.352 kb on - strand at 1515.382 kb on + strand at 1515.383 kb on - strand at 1515.407 kb on + strand at 1515.408 kb on - strand at 1515.453 kb on - strand at 1515.490 kb on - strand at 1515.490 kb on - strand at 1515.509 kb on + strand at 1515.509 kb on + strand at 1515.510 kb on - strand at 1515.510 kb on - strand at 1515.512 kb on - strand at 1515.644 kb on - strand, within PS417_06845 at 1515.644 kb on - strand, within PS417_06845 at 1516.167 kb on - strand at 1516.195 kb on - strand at 1516.195 kb on - strand at 1516.419 kb on - strand, within PS417_06850 at 1516.611 kb on - strand, within PS417_06850 at 1516.922 kb on + strand at 1517.061 kb on + strand, within PS417_06855 at 1517.061 kb on + strand, within PS417_06855 at 1517.061 kb on + strand, within PS417_06855 at 1517.061 kb on + strand, within PS417_06855 at 1517.061 kb on + strand, within PS417_06855 at 1517.062 kb on - strand, within PS417_06855 at 1517.062 kb on - strand, within PS417_06855 at 1517.062 kb on - strand, within PS417_06855 at 1517.118 kb on + strand, within PS417_06855 at 1517.118 kb on + strand, within PS417_06855 at 1517.119 kb on - strand, within PS417_06855 at 1517.119 kb on - strand, within PS417_06855 at 1517.119 kb on - strand, within PS417_06855 at 1517.142 kb on + strand, within PS417_06855 at 1517.142 kb on + strand, within PS417_06855 at 1517.142 kb on + strand, within PS417_06855 at 1517.143 kb on - strand, within PS417_06855 at 1517.143 kb on - strand, within PS417_06855 at 1517.143 kb on - strand, within PS417_06855 at 1517.347 kb on - strand, within PS417_06855 at 1517.579 kb on + strand at 1517.579 kb on + strand at 1517.579 kb on + strand at 1517.580 kb on - strand at 1517.580 kb on - strand at 1517.603 kb on + strand at 1517.603 kb on + strand at 1517.604 kb on - strand at 1517.604 kb on - strand at 1517.604 kb on - strand at 1517.644 kb on + strand at 1517.806 kb on + strand at 1517.807 kb on - strand at 1517.894 kb on - strand, within PS417_06860
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; solid stress remove 1,515,352 - +0.6 1,515,352 - -1.8 1,515,352 - -0.4 1,515,382 + +0.2 1,515,383 - +1.2 1,515,407 + +0.8 1,515,408 - -0.0 1,515,453 - -0.3 1,515,490 - -1.6 1,515,490 - -0.9 1,515,509 + +0.1 1,515,509 + +0.4 1,515,510 - -0.4 1,515,510 - +0.0 1,515,512 - -0.6 1,515,644 - PS417_06845 0.14 +0.0 1,515,644 - PS417_06845 0.14 +0.8 1,516,167 - -0.3 1,516,195 - -0.5 1,516,195 - -0.1 1,516,419 - PS417_06850 0.32 -1.6 1,516,611 - PS417_06850 0.58 -0.3 1,516,922 + -1.0 1,517,061 + PS417_06855 0.19 +0.0 1,517,061 + PS417_06855 0.19 -0.0 1,517,061 + PS417_06855 0.19 -0.3 1,517,061 + PS417_06855 0.19 -0.9 1,517,061 + PS417_06855 0.19 +0.5 1,517,062 - PS417_06855 0.19 +1.0 1,517,062 - PS417_06855 0.19 +0.0 1,517,062 - PS417_06855 0.19 -1.1 1,517,118 + PS417_06855 0.28 -0.1 1,517,118 + PS417_06855 0.28 +0.1 1,517,119 - PS417_06855 0.28 +0.3 1,517,119 - PS417_06855 0.28 -0.1 1,517,119 - PS417_06855 0.28 -1.1 1,517,142 + PS417_06855 0.32 +0.2 1,517,142 + PS417_06855 0.32 +0.6 1,517,142 + PS417_06855 0.32 -0.1 1,517,143 - PS417_06855 0.32 +0.4 1,517,143 - PS417_06855 0.32 -1.3 1,517,143 - PS417_06855 0.32 -0.4 1,517,347 - PS417_06855 0.65 +0.8 1,517,579 + -0.5 1,517,579 + +0.5 1,517,579 + -0.2 1,517,580 - +0.1 1,517,580 - +0.0 1,517,603 + +0.1 1,517,603 + -0.1 1,517,604 - -0.0 1,517,604 - +0.3 1,517,604 - +0.1 1,517,644 + +0.1 1,517,806 + +1.0 1,517,807 - -0.1 1,517,894 - PS417_06860 0.17 -0.3
Or see this region's nucleotide sequence