Experiment: Fraxetin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09625 and PS417_09630 are separated by 29 nucleotides PS417_09630 and PS417_09635 are separated by 1 nucleotides PS417_09635 and PS417_09640 overlap by 1 nucleotides
PS417_09625: PS417_09625 - sugar ABC transporter substrate-binding protein, at 2,085,942 to 2,086,718
_09625
PS417_09630: PS417_09630 - glycosyl transferase, at 2,086,748 to 2,087,659
_09630
PS417_09635: PS417_09635 - mannose-1-phosphate guanylyltransferase, at 2,087,661 to 2,089,121
_09635
PS417_09640: PS417_09640 - capsular biosynthesis protein, at 2,089,121 to 2,090,560
_09640
Position (kb)
2087
2088
2089
2090 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2086.668 kb on - strand at 2086.854 kb on - strand, within PS417_09630 at 2086.860 kb on - strand, within PS417_09630 at 2086.920 kb on + strand, within PS417_09630 at 2086.980 kb on + strand, within PS417_09630 at 2087.028 kb on + strand, within PS417_09630 at 2087.028 kb on + strand, within PS417_09630 at 2087.029 kb on - strand, within PS417_09630 at 2087.106 kb on + strand, within PS417_09630 at 2087.106 kb on + strand, within PS417_09630 at 2087.106 kb on + strand, within PS417_09630 at 2087.106 kb on + strand, within PS417_09630 at 2087.107 kb on - strand, within PS417_09630 at 2087.663 kb on - strand at 2087.692 kb on + strand at 2087.731 kb on + strand at 2087.812 kb on + strand, within PS417_09635 at 2087.812 kb on + strand, within PS417_09635 at 2087.813 kb on - strand, within PS417_09635 at 2087.813 kb on - strand, within PS417_09635 at 2087.859 kb on - strand, within PS417_09635 at 2087.989 kb on + strand, within PS417_09635 at 2087.990 kb on - strand, within PS417_09635 at 2088.029 kb on - strand, within PS417_09635 at 2088.159 kb on + strand, within PS417_09635 at 2088.159 kb on + strand, within PS417_09635 at 2088.182 kb on - strand, within PS417_09635 at 2088.182 kb on - strand, within PS417_09635 at 2088.354 kb on - strand, within PS417_09635 at 2088.634 kb on + strand, within PS417_09635 at 2089.101 kb on + strand at 2089.125 kb on + strand at 2089.126 kb on - strand at 2089.126 kb on - strand at 2089.174 kb on - strand at 2089.174 kb on - strand at 2089.412 kb on + strand, within PS417_09640 at 2089.413 kb on - strand, within PS417_09640 at 2089.536 kb on + strand, within PS417_09640 at 2089.536 kb on + strand, within PS417_09640 at 2089.536 kb on + strand, within PS417_09640 at 2089.537 kb on - strand, within PS417_09640 at 2089.537 kb on - strand, within PS417_09640 at 2090.101 kb on + strand, within PS417_09640 at 2090.102 kb on - strand, within PS417_09640
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; liquid stress remove 2,086,668 - -0.7 2,086,854 - PS417_09630 0.12 -0.6 2,086,860 - PS417_09630 0.12 -0.7 2,086,920 + PS417_09630 0.19 -1.6 2,086,980 + PS417_09630 0.25 -1.0 2,087,028 + PS417_09630 0.31 -1.3 2,087,028 + PS417_09630 0.31 -0.6 2,087,029 - PS417_09630 0.31 -2.9 2,087,106 + PS417_09630 0.39 -1.7 2,087,106 + PS417_09630 0.39 -0.5 2,087,106 + PS417_09630 0.39 -1.5 2,087,106 + PS417_09630 0.39 -1.9 2,087,107 - PS417_09630 0.39 -0.1 2,087,663 - +0.2 2,087,692 + +0.2 2,087,731 + -0.7 2,087,812 + PS417_09635 0.10 -0.5 2,087,812 + PS417_09635 0.10 -0.6 2,087,813 - PS417_09635 0.10 -0.4 2,087,813 - PS417_09635 0.10 -0.1 2,087,859 - PS417_09635 0.14 -0.4 2,087,989 + PS417_09635 0.22 -0.3 2,087,990 - PS417_09635 0.23 -0.4 2,088,029 - PS417_09635 0.25 -1.0 2,088,159 + PS417_09635 0.34 -0.5 2,088,159 + PS417_09635 0.34 +0.8 2,088,182 - PS417_09635 0.36 -1.4 2,088,182 - PS417_09635 0.36 +0.1 2,088,354 - PS417_09635 0.47 +0.8 2,088,634 + PS417_09635 0.67 -0.7 2,089,101 + -0.8 2,089,125 + -1.8 2,089,126 - -0.4 2,089,126 - -0.9 2,089,174 - -1.1 2,089,174 - -0.3 2,089,412 + PS417_09640 0.20 +0.3 2,089,413 - PS417_09640 0.20 -1.3 2,089,536 + PS417_09640 0.29 -1.4 2,089,536 + PS417_09640 0.29 -0.8 2,089,536 + PS417_09640 0.29 -1.3 2,089,537 - PS417_09640 0.29 -0.9 2,089,537 - PS417_09640 0.29 -1.2 2,090,101 + PS417_09640 0.68 -0.7 2,090,102 - PS417_09640 0.68 -1.9
Or see this region's nucleotide sequence