Experiment: Fraxetin 2 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01595 and PS417_01600 are separated by 30 nucleotides PS417_01600 and PS417_01605 are separated by 259 nucleotides
PS417_01595: PS417_01595 - peptidase S41, at 350,852 to 352,168
_01595
PS417_01600: PS417_01600 - peptidase M23, at 352,199 to 353,494
_01600
PS417_01605: PS417_01605 - phosphoglycerate mutase, at 353,754 to 355,280
_01605
Position (kb)
352
353
354 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 352.184 kb on - strand at 352.188 kb on + strand at 352.189 kb on - strand at 352.189 kb on - strand at 352.189 kb on - strand at 352.189 kb on - strand at 352.189 kb on - strand at 352.255 kb on + strand at 352.325 kb on + strand at 352.381 kb on - strand, within PS417_01600 at 353.067 kb on + strand, within PS417_01600 at 353.068 kb on - strand, within PS417_01600 at 353.074 kb on - strand, within PS417_01600 at 353.076 kb on + strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.401 kb on + strand at 353.494 kb on + strand at 353.527 kb on + strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.583 kb on + strand at 353.584 kb on - strand at 353.584 kb on - strand at 353.584 kb on - strand at 353.604 kb on - strand at 353.620 kb on + strand at 353.621 kb on - strand at 353.621 kb on - strand at 353.621 kb on - strand at 353.632 kb on + strand at 353.633 kb on - strand at 353.705 kb on + strand at 353.706 kb on - strand at 354.097 kb on + strand, within PS417_01605 at 354.098 kb on - strand, within PS417_01605
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; liquid stress remove 352,184 - +0.4 352,188 + -0.1 352,189 - +1.9 352,189 - +0.4 352,189 - -0.3 352,189 - +0.1 352,189 - +0.8 352,255 + +0.0 352,325 + -0.5 352,381 - PS417_01600 0.14 -1.0 353,067 + PS417_01600 0.67 -1.2 353,068 - PS417_01600 0.67 -0.7 353,074 - PS417_01600 0.68 -2.5 353,076 + PS417_01600 0.68 -1.0 353,077 - PS417_01600 0.68 -0.6 353,077 - PS417_01600 0.68 +1.3 353,077 - PS417_01600 0.68 +3.5 353,401 + -0.4 353,494 + +1.1 353,527 + +0.5 353,528 - +1.5 353,528 - -0.9 353,528 - -1.0 353,528 - -1.8 353,531 - +0.6 353,531 - -0.0 353,531 - +0.4 353,531 - -0.3 353,583 + -0.4 353,584 - +0.9 353,584 - +1.9 353,584 - +0.9 353,604 - -0.3 353,620 + -0.4 353,621 - -0.1 353,621 - +0.3 353,621 - +0.6 353,632 + -1.4 353,633 - +1.5 353,705 + +0.2 353,706 - -0.1 354,097 + PS417_01605 0.22 +2.5 354,098 - PS417_01605 0.23 +0.3
Or see this region's nucleotide sequence