Experiment: Fraxetin 2 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00740 and PS417_00745 are separated by 12 nucleotides PS417_00745 and PS417_00750 are separated by 2 nucleotides
PS417_00740: PS417_00740 - membrane protein, at 154,789 to 157,269
_00740
PS417_00745: PS417_00745 - outer membrane N-deacetylase, at 157,282 to 159,279
_00745
PS417_00750: PS417_00750 - N-glycosyltransferase, at 159,282 to 160,622
_00750
Position (kb) 157
158
159
160 Strain fitness (log2 ratio) -1
0
1
2 at 156.397 kb on + strand, within PS417_00740 at 156.908 kb on - strand, within PS417_00740 at 156.975 kb on + strand, within PS417_00740 at 157.043 kb on - strand at 157.096 kb on + strand at 157.096 kb on + strand at 157.096 kb on + strand at 157.097 kb on - strand at 157.097 kb on - strand at 157.112 kb on - strand at 157.259 kb on - strand at 157.267 kb on + strand at 157.267 kb on + strand at 157.529 kb on - strand, within PS417_00745 at 157.621 kb on + strand, within PS417_00745 at 157.622 kb on - strand, within PS417_00745 at 157.633 kb on + strand, within PS417_00745 at 157.918 kb on + strand, within PS417_00745 at 158.026 kb on + strand at 158.075 kb on - strand, within PS417_00745 at 158.245 kb on + strand, within PS417_00745 at 158.377 kb on + strand, within PS417_00745 at 158.377 kb on + strand, within PS417_00745 at 158.377 kb on + strand, within PS417_00745 at 158.377 kb on + strand, within PS417_00745 at 158.378 kb on - strand, within PS417_00745 at 158.464 kb on + strand, within PS417_00745 at 158.464 kb on + strand, within PS417_00745 at 158.566 kb on + strand, within PS417_00745 at 158.566 kb on + strand, within PS417_00745 at 158.566 kb on + strand, within PS417_00745 at 158.566 kb on + strand, within PS417_00745 at 158.621 kb on - strand, within PS417_00745 at 158.663 kb on - strand, within PS417_00745 at 158.962 kb on + strand, within PS417_00745 at 158.963 kb on - strand, within PS417_00745 at 159.011 kb on - strand, within PS417_00745 at 159.087 kb on - strand at 159.432 kb on + strand, within PS417_00750 at 159.433 kb on - strand, within PS417_00750 at 159.433 kb on - strand, within PS417_00750 at 159.531 kb on + strand, within PS417_00750 at 159.532 kb on - strand, within PS417_00750 at 159.753 kb on + strand, within PS417_00750 at 159.754 kb on - strand, within PS417_00750 at 159.805 kb on - strand, within PS417_00750 at 159.805 kb on - strand, within PS417_00750 at 159.805 kb on - strand, within PS417_00750 at 159.805 kb on - strand, within PS417_00750 at 159.996 kb on - strand, within PS417_00750 at 160.095 kb on + strand, within PS417_00750 at 160.096 kb on - strand, within PS417_00750
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; liquid stress remove 156,397 + PS417_00740 0.65 +1.0 156,908 - PS417_00740 0.85 +1.5 156,975 + PS417_00740 0.88 +1.2 157,043 - +1.2 157,096 + +1.0 157,096 + +0.8 157,096 + +1.8 157,097 - -0.2 157,097 - +1.1 157,112 - +0.9 157,259 - +2.4 157,267 + -0.6 157,267 + +0.8 157,529 - PS417_00745 0.12 +1.3 157,621 + PS417_00745 0.17 +0.8 157,622 - PS417_00745 0.17 +1.5 157,633 + PS417_00745 0.18 +2.2 157,918 + PS417_00745 0.32 +2.0 158,026 + +1.8 158,075 - PS417_00745 0.40 -0.3 158,245 + PS417_00745 0.48 +1.1 158,377 + PS417_00745 0.55 +1.6 158,377 + PS417_00745 0.55 +1.1 158,377 + PS417_00745 0.55 +1.3 158,377 + PS417_00745 0.55 +0.5 158,378 - PS417_00745 0.55 +1.4 158,464 + PS417_00745 0.59 +0.7 158,464 + PS417_00745 0.59 +0.8 158,566 + PS417_00745 0.64 +1.9 158,566 + PS417_00745 0.64 +0.1 158,566 + PS417_00745 0.64 +0.2 158,566 + PS417_00745 0.64 +1.7 158,621 - PS417_00745 0.67 +1.3 158,663 - PS417_00745 0.69 +1.9 158,962 + PS417_00745 0.84 +0.5 158,963 - PS417_00745 0.84 +0.7 159,011 - PS417_00745 0.87 +0.9 159,087 - -0.0 159,432 + PS417_00750 0.11 +1.6 159,433 - PS417_00750 0.11 +0.6 159,433 - PS417_00750 0.11 +0.8 159,531 + PS417_00750 0.19 +1.3 159,532 - PS417_00750 0.19 +1.5 159,753 + PS417_00750 0.35 +1.3 159,754 - PS417_00750 0.35 +0.4 159,805 - PS417_00750 0.39 +1.8 159,805 - PS417_00750 0.39 +2.5 159,805 - PS417_00750 0.39 +1.2 159,805 - PS417_00750 0.39 +1.9 159,996 - PS417_00750 0.53 +1.6 160,095 + PS417_00750 0.61 +1.1 160,096 - PS417_00750 0.61 +1.5
Or see this region's nucleotide sequence