Experiment: Fraxetin 2 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00735 and PS417_00740 are separated by 300 nucleotides PS417_00740 and PS417_00745 are separated by 12 nucleotides
PS417_00735: PS417_00735 - hypothetical protein, at 152,992 to 154,488
_00735
PS417_00740: PS417_00740 - membrane protein, at 154,789 to 157,269
_00740
PS417_00745: PS417_00745 - outer membrane N-deacetylase, at 157,282 to 159,279
_00745
Position (kb) 154
155
156
157
158 Strain fitness (log2 ratio) -1
0
1
2 at 153.827 kb on - strand, within PS417_00735 at 153.935 kb on - strand, within PS417_00735 at 153.935 kb on - strand, within PS417_00735 at 154.125 kb on - strand, within PS417_00735 at 154.370 kb on + strand at 154.371 kb on - strand at 154.388 kb on - strand at 154.388 kb on - strand at 154.486 kb on + strand at 154.491 kb on - strand at 154.511 kb on + strand at 154.512 kb on - strand at 154.612 kb on + strand at 154.648 kb on - strand at 154.681 kb on + strand at 154.682 kb on - strand at 154.682 kb on - strand at 154.689 kb on - strand at 154.699 kb on + strand at 154.699 kb on + strand at 154.699 kb on + strand at 154.699 kb on + strand at 154.700 kb on - strand at 154.752 kb on - strand at 154.752 kb on - strand at 154.752 kb on - strand at 154.773 kb on + strand at 154.788 kb on + strand at 154.789 kb on - strand at 154.898 kb on - strand at 155.410 kb on + strand, within PS417_00740 at 155.411 kb on - strand, within PS417_00740 at 155.411 kb on - strand, within PS417_00740 at 155.575 kb on + strand, within PS417_00740 at 155.575 kb on + strand, within PS417_00740 at 155.575 kb on + strand, within PS417_00740 at 155.576 kb on - strand, within PS417_00740 at 155.576 kb on - strand, within PS417_00740 at 155.576 kb on - strand, within PS417_00740 at 155.576 kb on - strand, within PS417_00740 at 155.576 kb on - strand, within PS417_00740 at 155.767 kb on + strand, within PS417_00740 at 155.767 kb on + strand, within PS417_00740 at 155.768 kb on - strand, within PS417_00740 at 155.768 kb on - strand, within PS417_00740 at 155.794 kb on + strand, within PS417_00740 at 155.903 kb on - strand, within PS417_00740 at 156.061 kb on + strand, within PS417_00740 at 156.061 kb on + strand, within PS417_00740 at 156.157 kb on + strand, within PS417_00740 at 156.157 kb on + strand, within PS417_00740 at 156.397 kb on + strand, within PS417_00740 at 156.908 kb on - strand, within PS417_00740 at 156.975 kb on + strand, within PS417_00740 at 157.043 kb on - strand at 157.096 kb on + strand at 157.096 kb on + strand at 157.096 kb on + strand at 157.097 kb on - strand at 157.097 kb on - strand at 157.112 kb on - strand at 157.259 kb on - strand at 157.267 kb on + strand at 157.267 kb on + strand at 157.529 kb on - strand, within PS417_00745 at 157.621 kb on + strand, within PS417_00745 at 157.622 kb on - strand, within PS417_00745 at 157.633 kb on + strand, within PS417_00745 at 157.918 kb on + strand, within PS417_00745 at 158.026 kb on + strand at 158.075 kb on - strand, within PS417_00745 at 158.245 kb on + strand, within PS417_00745
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; liquid stress remove 153,827 - PS417_00735 0.56 -0.5 153,935 - PS417_00735 0.63 +1.8 153,935 - PS417_00735 0.63 -0.3 154,125 - PS417_00735 0.76 -0.0 154,370 + -0.0 154,371 - +0.7 154,388 - -0.1 154,388 - +0.1 154,486 + +0.0 154,491 - -0.0 154,511 + -0.7 154,512 - +0.7 154,612 + -1.6 154,648 - +1.1 154,681 + -0.5 154,682 - +1.4 154,682 - -0.0 154,689 - +0.1 154,699 + +0.6 154,699 + +0.9 154,699 + +1.3 154,699 + -0.4 154,700 - +0.5 154,752 - +0.7 154,752 - +0.6 154,752 - +2.3 154,773 + -0.7 154,788 + +0.3 154,789 - +0.9 154,898 - +1.0 155,410 + PS417_00740 0.25 +1.3 155,411 - PS417_00740 0.25 +1.2 155,411 - PS417_00740 0.25 +1.1 155,575 + PS417_00740 0.32 +1.3 155,575 + PS417_00740 0.32 +1.5 155,575 + PS417_00740 0.32 +1.6 155,576 - PS417_00740 0.32 +1.3 155,576 - PS417_00740 0.32 +1.0 155,576 - PS417_00740 0.32 +0.7 155,576 - PS417_00740 0.32 +2.1 155,576 - PS417_00740 0.32 +1.5 155,767 + PS417_00740 0.39 +1.1 155,767 + PS417_00740 0.39 +0.3 155,768 - PS417_00740 0.39 +1.3 155,768 - PS417_00740 0.39 +1.3 155,794 + PS417_00740 0.41 +1.3 155,903 - PS417_00740 0.45 +0.7 156,061 + PS417_00740 0.51 -1.0 156,061 + PS417_00740 0.51 +1.3 156,157 + PS417_00740 0.55 +1.1 156,157 + PS417_00740 0.55 +1.9 156,397 + PS417_00740 0.65 +1.0 156,908 - PS417_00740 0.85 +1.5 156,975 + PS417_00740 0.88 +1.2 157,043 - +1.2 157,096 + +1.0 157,096 + +0.8 157,096 + +1.8 157,097 - -0.2 157,097 - +1.1 157,112 - +0.9 157,259 - +2.4 157,267 + -0.6 157,267 + +0.8 157,529 - PS417_00745 0.12 +1.3 157,621 + PS417_00745 0.17 +0.8 157,622 - PS417_00745 0.17 +1.5 157,633 + PS417_00745 0.18 +2.2 157,918 + PS417_00745 0.32 +2.0 158,026 + +1.8 158,075 - PS417_00745 0.40 -0.3 158,245 + PS417_00745 0.48 +1.1
Or see this region's nucleotide sequence