Experiment: Fraxetin 1 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25660 and PS417_25665 are separated by 136 nucleotides PS417_25665 and PS417_25670 are separated by 24 nucleotides PS417_25670 and PS417_25675 are separated by 70 nucleotides
PS417_25660: PS417_25660 - N-acetyl-gamma-glutamyl-phosphate reductase, at 5,542,898 to 5,543,932
_25660
PS417_25665: PS417_25665 - membrane protein, at 5,544,069 to 5,544,497
_25665
PS417_25670: PS417_25670 - 2-nitropropane dioxygenase, at 5,544,522 to 5,545,484
_25670
PS417_25675: PS417_25675 - membrane protein, at 5,545,555 to 5,546,511
_25675
Position (kb)
5544
5545
5546 Strain fitness (log2 ratio)
-2
-1
0
1 at 5543.796 kb on + strand, within PS417_25660 at 5543.933 kb on - strand at 5543.973 kb on + strand at 5543.973 kb on + strand at 5544.012 kb on + strand at 5544.013 kb on - strand at 5544.031 kb on - strand at 5544.033 kb on + strand at 5544.033 kb on + strand at 5544.033 kb on + strand at 5544.033 kb on + strand at 5544.034 kb on - strand at 5544.034 kb on - strand at 5544.034 kb on - strand at 5544.034 kb on - strand at 5544.034 kb on - strand at 5544.064 kb on + strand at 5544.496 kb on - strand at 5544.496 kb on - strand at 5544.505 kb on + strand at 5544.825 kb on - strand, within PS417_25670 at 5544.853 kb on + strand, within PS417_25670 at 5544.854 kb on - strand, within PS417_25670 at 5544.862 kb on + strand, within PS417_25670 at 5545.111 kb on - strand, within PS417_25670 at 5545.161 kb on + strand, within PS417_25670 at 5545.357 kb on + strand, within PS417_25670 at 5545.358 kb on - strand, within PS417_25670 at 5545.426 kb on + strand at 5545.426 kb on + strand at 5545.426 kb on + strand at 5545.426 kb on + strand at 5545.522 kb on + strand at 5545.522 kb on + strand at 5545.736 kb on - strand, within PS417_25675 at 5545.904 kb on - strand, within PS417_25675 at 5546.069 kb on + strand, within PS417_25675 at 5546.115 kb on - strand, within PS417_25675 at 5546.164 kb on + strand, within PS417_25675 at 5546.248 kb on + strand, within PS417_25675 at 5546.383 kb on - strand, within PS417_25675 at 5546.395 kb on + strand, within PS417_25675 at 5546.395 kb on + strand, within PS417_25675 at 5546.395 kb on + strand, within PS417_25675
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; liquid stress remove 5,543,796 + PS417_25660 0.87 -0.3 5,543,933 - -0.2 5,543,973 + -0.3 5,543,973 + +0.3 5,544,012 + +0.5 5,544,013 - -1.3 5,544,031 - -0.0 5,544,033 + -0.7 5,544,033 + +1.1 5,544,033 + -0.1 5,544,033 + -0.1 5,544,034 - -0.7 5,544,034 - -0.1 5,544,034 - +0.2 5,544,034 - -0.5 5,544,034 - -0.7 5,544,064 + +1.1 5,544,496 - +0.5 5,544,496 - +0.2 5,544,505 + +0.8 5,544,825 - PS417_25670 0.31 -0.1 5,544,853 + PS417_25670 0.34 -0.4 5,544,854 - PS417_25670 0.34 +0.3 5,544,862 + PS417_25670 0.35 -0.9 5,545,111 - PS417_25670 0.61 -1.4 5,545,161 + PS417_25670 0.66 -0.4 5,545,357 + PS417_25670 0.87 -0.6 5,545,358 - PS417_25670 0.87 +0.0 5,545,426 + -1.1 5,545,426 + +0.2 5,545,426 + -0.0 5,545,426 + +0.2 5,545,522 + +0.8 5,545,522 + +0.0 5,545,736 - PS417_25675 0.19 -0.5 5,545,904 - PS417_25675 0.36 -1.4 5,546,069 + PS417_25675 0.54 -0.4 5,546,115 - PS417_25675 0.59 +0.3 5,546,164 + PS417_25675 0.64 +1.0 5,546,248 + PS417_25675 0.72 -2.0 5,546,383 - PS417_25675 0.87 -0.1 5,546,395 + PS417_25675 0.88 -0.2 5,546,395 + PS417_25675 0.88 -0.3 5,546,395 + PS417_25675 0.88 +0.9
Or see this region's nucleotide sequence