Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26520 and PS417_26525 are separated by 221 nucleotides PS417_26525 and PS417_26530 are separated by 226 nucleotides PS417_26530 and PS417_26535 are separated by 32 nucleotides
PS417_26520: PS417_26520 - amino acid ABC transporter substrate-binding protein, at 5,735,619 to 5,736,410
_26520
PS417_26525: PS417_26525 - DEAD/DEAH box helicase, at 5,736,632 to 5,738,512
_26525
PS417_26530: PS417_26530 - hypothetical protein, at 5,738,739 to 5,739,317
_26530
PS417_26535: PS417_26535 - cytochrome B561, at 5,739,350 to 5,739,901
_26535
Position (kb)
5736
5737
5738
5739 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5735.658 kb on - strand at 5735.658 kb on - strand at 5735.658 kb on - strand at 5735.680 kb on - strand at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.728 kb on - strand, within PS417_26520 at 5736.031 kb on - strand, within PS417_26520 at 5736.342 kb on + strand at 5736.421 kb on - strand at 5736.421 kb on - strand at 5736.422 kb on + strand at 5736.423 kb on - strand at 5736.423 kb on - strand at 5736.423 kb on - strand at 5736.613 kb on - strand at 5736.613 kb on - strand at 5736.616 kb on + strand at 5736.627 kb on + strand at 5736.628 kb on - strand at 5736.666 kb on + strand at 5736.667 kb on - strand at 5736.693 kb on - strand at 5736.693 kb on - strand at 5736.703 kb on + strand at 5736.703 kb on + strand at 5736.704 kb on - strand at 5736.775 kb on + strand at 5736.781 kb on + strand at 5736.936 kb on - strand, within PS417_26525 at 5736.936 kb on - strand, within PS417_26525 at 5736.936 kb on - strand, within PS417_26525 at 5736.968 kb on - strand, within PS417_26525 at 5737.315 kb on - strand, within PS417_26525 at 5737.628 kb on + strand, within PS417_26525 at 5737.628 kb on + strand, within PS417_26525 at 5737.628 kb on + strand, within PS417_26525 at 5737.629 kb on - strand, within PS417_26525 at 5738.093 kb on + strand, within PS417_26525 at 5738.094 kb on - strand, within PS417_26525 at 5738.740 kb on + strand at 5739.164 kb on + strand, within PS417_26530 at 5739.241 kb on + strand, within PS417_26530 at 5739.325 kb on - strand at 5739.463 kb on - strand, within PS417_26535
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 5,735,658 - -0.7 5,735,658 - +0.0 5,735,658 - +1.0 5,735,680 - -0.2 5,735,722 - PS417_26520 0.13 +0.4 5,735,722 - PS417_26520 0.13 -1.3 5,735,722 - PS417_26520 0.13 +0.0 5,735,722 - PS417_26520 0.13 -0.6 5,735,722 - PS417_26520 0.13 -0.2 5,735,722 - PS417_26520 0.13 -0.3 5,735,728 - PS417_26520 0.14 -0.5 5,736,031 - PS417_26520 0.52 -1.0 5,736,342 + +2.3 5,736,421 - +0.4 5,736,421 - -0.2 5,736,422 + +0.1 5,736,423 - -0.6 5,736,423 - -0.4 5,736,423 - -0.8 5,736,613 - +0.1 5,736,613 - -0.8 5,736,616 + +0.1 5,736,627 + -0.1 5,736,628 - -1.0 5,736,666 + -0.0 5,736,667 - -0.4 5,736,693 - -0.9 5,736,693 - -0.7 5,736,703 + -0.0 5,736,703 + -0.4 5,736,704 - -0.4 5,736,775 + -0.7 5,736,781 + -0.8 5,736,936 - PS417_26525 0.16 -1.3 5,736,936 - PS417_26525 0.16 -1.0 5,736,936 - PS417_26525 0.16 -1.0 5,736,968 - PS417_26525 0.18 +0.5 5,737,315 - PS417_26525 0.36 -2.2 5,737,628 + PS417_26525 0.53 -0.2 5,737,628 + PS417_26525 0.53 -0.8 5,737,628 + PS417_26525 0.53 +0.3 5,737,629 - PS417_26525 0.53 -0.9 5,738,093 + PS417_26525 0.78 -0.9 5,738,094 - PS417_26525 0.78 -1.4 5,738,740 + -0.8 5,739,164 + PS417_26530 0.73 -1.5 5,739,241 + PS417_26530 0.87 +0.3 5,739,325 - +0.0 5,739,463 - PS417_26535 0.20 +0.2
Or see this region's nucleotide sequence