Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19650 and PS417_19655 are separated by 81 nucleotides PS417_19655 and PS417_19660 overlap by 1 nucleotides PS417_19660 and PS417_19665 are separated by 51 nucleotides PS417_19665 and PS417_19670 are separated by 15 nucleotides
PS417_19650: PS417_19650 - chemotaxis protein CheW, at 4,271,637 to 4,272,119
_19650
PS417_19655: PS417_19655 - chemotaxis protein CheW, at 4,272,201 to 4,272,989
_19655
PS417_19660: PS417_19660 - cobalamin biosynthesis protein CobQ, at 4,272,989 to 4,273,777
_19660
PS417_19665: PS417_19665 - flagellar motor protein MotD, at 4,273,829 to 4,274,716
_19665
PS417_19670: PS417_19670 - flagellar motor protein, at 4,274,732 to 4,275,472
_19670
Position (kb)
4272
4273
4274 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4272.040 kb on + strand, within PS417_19650 at 4272.040 kb on + strand, within PS417_19650 at 4272.040 kb on + strand, within PS417_19650 at 4272.066 kb on - strand, within PS417_19650 at 4272.120 kb on - strand at 4272.146 kb on + strand at 4272.147 kb on - strand at 4272.159 kb on + strand at 4272.159 kb on + strand at 4272.160 kb on - strand at 4272.166 kb on - strand at 4272.287 kb on + strand, within PS417_19655 at 4272.287 kb on + strand, within PS417_19655 at 4272.288 kb on - strand, within PS417_19655 at 4272.288 kb on - strand, within PS417_19655 at 4272.288 kb on - strand, within PS417_19655 at 4272.583 kb on + strand, within PS417_19655 at 4273.052 kb on + strand at 4273.052 kb on + strand at 4273.134 kb on + strand, within PS417_19660 at 4273.134 kb on + strand, within PS417_19660 at 4273.134 kb on + strand, within PS417_19660 at 4273.599 kb on + strand, within PS417_19660 at 4273.600 kb on - strand, within PS417_19660 at 4273.638 kb on + strand, within PS417_19660 at 4273.639 kb on - strand, within PS417_19660 at 4273.825 kb on - strand at 4273.825 kb on - strand at 4274.094 kb on - strand, within PS417_19665 at 4274.094 kb on - strand, within PS417_19665 at 4274.581 kb on - strand, within PS417_19665 at 4274.581 kb on - strand, within PS417_19665 at 4274.610 kb on + strand, within PS417_19665 at 4274.610 kb on + strand, within PS417_19665 at 4274.723 kb on + strand at 4274.723 kb on + strand at 4274.724 kb on - strand at 4274.724 kb on - strand at 4274.724 kb on - strand at 4274.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 4,272,040 + PS417_19650 0.83 +0.3 4,272,040 + PS417_19650 0.83 +2.4 4,272,040 + PS417_19650 0.83 -1.2 4,272,066 - PS417_19650 0.89 -0.4 4,272,120 - -0.2 4,272,146 + -0.7 4,272,147 - +1.6 4,272,159 + -0.7 4,272,159 + -1.7 4,272,160 - +0.3 4,272,166 - -0.1 4,272,287 + PS417_19655 0.11 -0.9 4,272,287 + PS417_19655 0.11 -1.1 4,272,288 - PS417_19655 0.11 +0.0 4,272,288 - PS417_19655 0.11 -0.3 4,272,288 - PS417_19655 0.11 -0.2 4,272,583 + PS417_19655 0.48 -1.0 4,273,052 + +1.0 4,273,052 + -0.3 4,273,134 + PS417_19660 0.18 -0.8 4,273,134 + PS417_19660 0.18 -0.4 4,273,134 + PS417_19660 0.18 -1.0 4,273,599 + PS417_19660 0.77 -0.9 4,273,600 - PS417_19660 0.77 -1.0 4,273,638 + PS417_19660 0.82 -0.9 4,273,639 - PS417_19660 0.82 -2.6 4,273,825 - -0.1 4,273,825 - +0.9 4,274,094 - PS417_19665 0.30 -0.1 4,274,094 - PS417_19665 0.30 +0.6 4,274,581 - PS417_19665 0.85 +0.5 4,274,581 - PS417_19665 0.85 +1.2 4,274,610 + PS417_19665 0.88 +0.4 4,274,610 + PS417_19665 0.88 -0.0 4,274,723 + +1.0 4,274,723 + +1.0 4,274,724 - -0.6 4,274,724 - -0.0 4,274,724 - -0.1 4,274,724 - -0.0
Or see this region's nucleotide sequence