Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15390 and PS417_15395 are separated by 36 nucleotides PS417_15395 and PS417_15400 are separated by 131 nucleotides PS417_15400 and PS417_15405 overlap by 26 nucleotides PS417_15405 and PS417_15410 are separated by 96 nucleotides
PS417_15390: PS417_15390 - hypothetical protein, at 3,375,691 to 3,376,032
_15390
PS417_15395: PS417_15395 - ATPase, at 3,376,069 to 3,376,713
_15395
PS417_15400: PS417_15400 - hypothetical protein, at 3,376,845 to 3,377,117
_15400
PS417_15405: PS417_15405 - glutathione S-transferase, at 3,377,092 to 3,377,709
_15405
PS417_15410: PS417_15410 - hypothetical protein, at 3,377,806 to 3,378,354
_15410
Position (kb)
3376
3377
3378 Strain fitness (log2 ratio)
-2
-1
0
1 at 3376.235 kb on + strand, within PS417_15395 at 3376.235 kb on + strand, within PS417_15395 at 3376.235 kb on + strand, within PS417_15395 at 3376.236 kb on - strand, within PS417_15395 at 3376.236 kb on - strand, within PS417_15395 at 3376.236 kb on - strand, within PS417_15395 at 3376.373 kb on + strand, within PS417_15395 at 3376.526 kb on + strand, within PS417_15395 at 3376.561 kb on + strand, within PS417_15395 at 3376.561 kb on + strand, within PS417_15395 at 3376.562 kb on - strand, within PS417_15395 at 3376.562 kb on - strand, within PS417_15395 at 3376.562 kb on - strand, within PS417_15395 at 3376.562 kb on - strand, within PS417_15395 at 3376.594 kb on + strand, within PS417_15395 at 3376.594 kb on + strand, within PS417_15395 at 3376.595 kb on - strand at 3376.595 kb on - strand, within PS417_15395 at 3376.595 kb on - strand, within PS417_15395 at 3376.612 kb on + strand, within PS417_15395 at 3376.613 kb on - strand, within PS417_15395 at 3376.833 kb on - strand at 3376.891 kb on + strand, within PS417_15400 at 3376.921 kb on - strand, within PS417_15400 at 3377.093 kb on + strand at 3377.160 kb on - strand, within PS417_15405 at 3377.180 kb on - strand, within PS417_15405 at 3377.419 kb on + strand, within PS417_15405 at 3377.420 kb on - strand, within PS417_15405 at 3377.493 kb on - strand, within PS417_15405 at 3377.536 kb on + strand, within PS417_15405 at 3377.684 kb on + strand at 3377.685 kb on - strand at 3377.685 kb on - strand at 3377.685 kb on - strand at 3377.688 kb on + strand at 3377.688 kb on + strand at 3377.688 kb on + strand at 3377.689 kb on - strand at 3377.689 kb on - strand at 3377.689 kb on - strand at 3377.699 kb on + strand at 3377.699 kb on + strand at 3377.700 kb on - strand at 3377.807 kb on + strand at 3378.018 kb on - strand, within PS417_15410 at 3378.114 kb on + strand, within PS417_15410
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 3,376,235 + PS417_15395 0.26 +0.4 3,376,235 + PS417_15395 0.26 -0.3 3,376,235 + PS417_15395 0.26 -0.4 3,376,236 - PS417_15395 0.26 +1.2 3,376,236 - PS417_15395 0.26 -0.5 3,376,236 - PS417_15395 0.26 -0.2 3,376,373 + PS417_15395 0.47 -1.0 3,376,526 + PS417_15395 0.71 +0.2 3,376,561 + PS417_15395 0.76 -0.0 3,376,561 + PS417_15395 0.76 -0.9 3,376,562 - PS417_15395 0.76 +0.1 3,376,562 - PS417_15395 0.76 -0.5 3,376,562 - PS417_15395 0.76 -0.6 3,376,562 - PS417_15395 0.76 +0.4 3,376,594 + PS417_15395 0.81 +0.9 3,376,594 + PS417_15395 0.81 -0.3 3,376,595 - +0.6 3,376,595 - PS417_15395 0.82 -1.3 3,376,595 - PS417_15395 0.82 -1.2 3,376,612 + PS417_15395 0.84 -0.3 3,376,613 - PS417_15395 0.84 -0.1 3,376,833 - -0.5 3,376,891 + PS417_15400 0.17 -0.6 3,376,921 - PS417_15400 0.28 -1.6 3,377,093 + -0.3 3,377,160 - PS417_15405 0.11 -0.2 3,377,180 - PS417_15405 0.14 -0.2 3,377,419 + PS417_15405 0.53 -0.2 3,377,420 - PS417_15405 0.53 -0.5 3,377,493 - PS417_15405 0.65 +0.2 3,377,536 + PS417_15405 0.72 -0.2 3,377,684 + -0.5 3,377,685 - -0.6 3,377,685 - +0.0 3,377,685 - +0.0 3,377,688 + +0.0 3,377,688 + -0.3 3,377,688 + +0.5 3,377,689 - -0.9 3,377,689 - +0.5 3,377,689 - -0.3 3,377,699 + -2.5 3,377,699 + +1.4 3,377,700 - -1.0 3,377,807 + -1.8 3,378,018 - PS417_15410 0.39 -0.1 3,378,114 + PS417_15410 0.56 +0.2
Or see this region's nucleotide sequence