Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25010 and PS417_25015 are separated by 710 nucleotides
PS417_25010: PS417_25010 - fimbrial assembly protein, at 5,422,481 to 5,425,000
_25010
PS417_25015: PS417_25015 - fimbria A protein, at 5,425,711 to 5,426,232
_25015
Position (kb)
5425
5426
5427 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5424.784 kb on + strand at 5424.785 kb on - strand at 5424.835 kb on - strand at 5424.868 kb on + strand at 5424.891 kb on + strand at 5424.940 kb on + strand at 5424.976 kb on + strand at 5425.070 kb on - strand at 5425.180 kb on + strand at 5425.182 kb on + strand at 5425.403 kb on + strand at 5425.403 kb on + strand at 5425.414 kb on + strand at 5425.630 kb on + strand at 5425.638 kb on - strand at 5425.652 kb on + strand at 5425.663 kb on + strand at 5425.663 kb on + strand at 5425.709 kb on + strand at 5425.709 kb on + strand at 5425.787 kb on - strand, within PS417_25015 at 5425.787 kb on - strand, within PS417_25015 at 5425.790 kb on + strand, within PS417_25015 at 5425.809 kb on + strand, within PS417_25015 at 5425.809 kb on + strand, within PS417_25015 at 5425.843 kb on - strand, within PS417_25015 at 5425.843 kb on - strand, within PS417_25015 at 5425.975 kb on - strand, within PS417_25015 at 5425.990 kb on + strand, within PS417_25015 at 5425.990 kb on + strand, within PS417_25015 at 5426.011 kb on + strand, within PS417_25015 at 5426.012 kb on - strand, within PS417_25015 at 5426.067 kb on + strand, within PS417_25015 at 5426.110 kb on - strand, within PS417_25015 at 5426.130 kb on + strand at 5426.130 kb on + strand, within PS417_25015 at 5426.131 kb on - strand, within PS417_25015 at 5426.219 kb on - strand at 5426.349 kb on + strand at 5426.349 kb on + strand at 5426.349 kb on + strand at 5426.349 kb on + strand at 5426.465 kb on + strand at 5426.718 kb on + strand at 5426.982 kb on + strand at 5427.083 kb on + strand at 5427.084 kb on - strand at 5427.084 kb on - strand at 5427.124 kb on + strand at 5427.124 kb on + strand at 5427.188 kb on + strand at 5427.188 kb on + strand at 5427.189 kb on - strand at 5427.189 kb on - strand at 5427.189 kb on - strand at 5427.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,424,784 + -0.2 5,424,785 - +0.3 5,424,835 - -0.1 5,424,868 + +0.2 5,424,891 + -0.1 5,424,940 + +0.2 5,424,976 + -0.7 5,425,070 - +0.4 5,425,180 + -0.2 5,425,182 + -0.1 5,425,403 + +0.6 5,425,403 + +0.2 5,425,414 + -0.2 5,425,630 + +0.1 5,425,638 - -0.6 5,425,652 + -0.2 5,425,663 + +0.2 5,425,663 + -0.9 5,425,709 + -0.3 5,425,709 + -1.5 5,425,787 - PS417_25015 0.15 -2.2 5,425,787 - PS417_25015 0.15 -1.0 5,425,790 + PS417_25015 0.15 -1.3 5,425,809 + PS417_25015 0.19 -1.0 5,425,809 + PS417_25015 0.19 -0.1 5,425,843 - PS417_25015 0.25 -0.9 5,425,843 - PS417_25015 0.25 -2.9 5,425,975 - PS417_25015 0.51 -0.0 5,425,990 + PS417_25015 0.53 -0.5 5,425,990 + PS417_25015 0.53 -0.1 5,426,011 + PS417_25015 0.57 +0.4 5,426,012 - PS417_25015 0.58 -1.3 5,426,067 + PS417_25015 0.68 -0.0 5,426,110 - PS417_25015 0.76 -2.3 5,426,130 + -0.9 5,426,130 + PS417_25015 0.80 -0.1 5,426,131 - PS417_25015 0.80 -1.5 5,426,219 - -1.7 5,426,349 + -0.7 5,426,349 + +2.2 5,426,349 + +1.0 5,426,349 + +0.1 5,426,465 + -0.5 5,426,718 + -0.1 5,426,982 + -1.5 5,427,083 + +0.4 5,427,084 - -0.9 5,427,084 - -1.3 5,427,124 + -0.6 5,427,124 + +1.2 5,427,188 + -1.8 5,427,188 + +0.2 5,427,189 - -0.5 5,427,189 - -1.4 5,427,189 - -1.5 5,427,218 - -0.5
Or see this region's nucleotide sequence