Experiment: Fraxetin 2 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22725 and PS417_22730 are separated by 133 nucleotides PS417_22730 and PS417_22735 are separated by 139 nucleotides PS417_22735 and PS417_22740 are separated by 31 nucleotides
PS417_22725: PS417_22725 - chemotaxis protein, at 4,922,230 to 4,924,368
_22725
PS417_22730: PS417_22730 - nitroreductase, at 4,924,502 to 4,925,065
_22730
PS417_22735: PS417_22735 - thiol oxidoreductase, at 4,925,205 to 4,926,632
_22735
PS417_22740: PS417_22740 - imelysin, at 4,926,664 to 4,927,728
_22740
Position (kb)
4925
4926
4927 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4924.482 kb on + strand at 4924.482 kb on + strand at 4924.483 kb on - strand at 4924.483 kb on - strand at 4924.546 kb on + strand at 4925.283 kb on - strand at 4925.283 kb on - strand at 4925.411 kb on + strand, within PS417_22735 at 4925.510 kb on + strand, within PS417_22735 at 4925.552 kb on + strand, within PS417_22735 at 4925.553 kb on - strand, within PS417_22735 at 4925.553 kb on - strand, within PS417_22735 at 4925.553 kb on - strand, within PS417_22735 at 4925.713 kb on - strand, within PS417_22735 at 4925.713 kb on - strand, within PS417_22735 at 4925.713 kb on - strand, within PS417_22735 at 4925.885 kb on + strand, within PS417_22735 at 4925.886 kb on - strand, within PS417_22735 at 4925.886 kb on - strand, within PS417_22735 at 4926.051 kb on - strand, within PS417_22735 at 4926.186 kb on + strand, within PS417_22735 at 4926.186 kb on + strand, within PS417_22735 at 4926.186 kb on + strand, within PS417_22735 at 4926.186 kb on + strand, within PS417_22735 at 4926.261 kb on + strand, within PS417_22735 at 4926.261 kb on + strand, within PS417_22735 at 4926.628 kb on + strand at 4926.628 kb on + strand at 4926.629 kb on - strand at 4926.630 kb on + strand at 4926.630 kb on + strand at 4926.630 kb on + strand at 4926.631 kb on - strand at 4926.646 kb on + strand at 4926.784 kb on + strand, within PS417_22740 at 4926.959 kb on + strand, within PS417_22740 at 4926.959 kb on + strand, within PS417_22740 at 4926.960 kb on - strand, within PS417_22740 at 4926.960 kb on - strand, within PS417_22740 at 4927.090 kb on + strand, within PS417_22740 at 4927.091 kb on - strand, within PS417_22740 at 4927.091 kb on - strand, within PS417_22740 at 4927.091 kb on - strand, within PS417_22740 at 4927.296 kb on - strand, within PS417_22740 at 4927.296 kb on - strand, within PS417_22740 at 4927.540 kb on + strand, within PS417_22740 at 4927.541 kb on - strand, within PS417_22740 at 4927.630 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 2 mM; solid stress remove 4,924,482 + +0.0 4,924,482 + -0.0 4,924,483 - +0.1 4,924,483 - +0.5 4,924,546 + +0.5 4,925,283 - +0.3 4,925,283 - -1.6 4,925,411 + PS417_22735 0.14 +0.3 4,925,510 + PS417_22735 0.21 -2.3 4,925,552 + PS417_22735 0.24 +0.7 4,925,553 - PS417_22735 0.24 -2.0 4,925,553 - PS417_22735 0.24 -1.6 4,925,553 - PS417_22735 0.24 -2.2 4,925,713 - PS417_22735 0.36 -1.3 4,925,713 - PS417_22735 0.36 -0.6 4,925,713 - PS417_22735 0.36 -0.6 4,925,885 + PS417_22735 0.48 -1.7 4,925,886 - PS417_22735 0.48 -1.1 4,925,886 - PS417_22735 0.48 -2.8 4,926,051 - PS417_22735 0.59 -1.7 4,926,186 + PS417_22735 0.69 +0.6 4,926,186 + PS417_22735 0.69 -0.9 4,926,186 + PS417_22735 0.69 -2.2 4,926,186 + PS417_22735 0.69 -0.4 4,926,261 + PS417_22735 0.74 -2.7 4,926,261 + PS417_22735 0.74 -2.4 4,926,628 + -1.4 4,926,628 + -2.1 4,926,629 - -2.4 4,926,630 + -0.3 4,926,630 + +0.3 4,926,630 + +0.4 4,926,631 - +0.0 4,926,646 + +0.3 4,926,784 + PS417_22740 0.11 -2.0 4,926,959 + PS417_22740 0.28 -1.5 4,926,959 + PS417_22740 0.28 +0.2 4,926,960 - PS417_22740 0.28 -0.7 4,926,960 - PS417_22740 0.28 -1.3 4,927,090 + PS417_22740 0.40 -1.9 4,927,091 - PS417_22740 0.40 -1.8 4,927,091 - PS417_22740 0.40 -1.5 4,927,091 - PS417_22740 0.40 -1.6 4,927,296 - PS417_22740 0.59 -1.3 4,927,296 - PS417_22740 0.59 -0.9 4,927,540 + PS417_22740 0.82 -2.1 4,927,541 - PS417_22740 0.82 -1.4 4,927,630 - -1.3
Or see this region's nucleotide sequence