Experiment: Fraxetin 1 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07510 and PS417_07515 are separated by 188 nucleotides PS417_07515 and PS417_07520 are separated by 191 nucleotides
PS417_07510: PS417_07510 - aspartyl beta-hydroxylase, at 1,650,197 to 1,651,135
_07510
PS417_07515: PS417_07515 - aconitate hydratase, at 1,651,324 to 1,654,065
_07515
PS417_07520: PS417_07520 - 23S rRNA methyltransferase, at 1,654,257 to 1,655,333
_07520
Position (kb)
1651
1652
1653
1654
1655 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1650.377 kb on + strand, within PS417_07510 at 1650.470 kb on + strand, within PS417_07510 at 1650.542 kb on + strand, within PS417_07510 at 1650.543 kb on - strand, within PS417_07510 at 1650.543 kb on - strand, within PS417_07510 at 1650.748 kb on + strand, within PS417_07510 at 1650.771 kb on - strand, within PS417_07510 at 1650.812 kb on + strand at 1650.992 kb on + strand, within PS417_07510 at 1650.992 kb on + strand, within PS417_07510 at 1651.160 kb on + strand at 1651.160 kb on + strand at 1651.160 kb on + strand at 1651.251 kb on + strand at 1651.251 kb on + strand at 1651.252 kb on - strand at 1651.298 kb on - strand at 1651.313 kb on + strand at 1651.325 kb on + strand at 1651.325 kb on + strand at 1651.325 kb on + strand at 1651.326 kb on - strand at 1651.352 kb on + strand at 1651.353 kb on - strand at 1651.379 kb on + strand at 1651.380 kb on - strand at 1651.380 kb on - strand at 1651.432 kb on - strand at 1651.739 kb on + strand, within PS417_07515 at 1651.740 kb on - strand, within PS417_07515 at 1651.740 kb on - strand, within PS417_07515 at 1651.757 kb on + strand, within PS417_07515 at 1651.757 kb on + strand, within PS417_07515 at 1651.787 kb on + strand, within PS417_07515 at 1651.787 kb on + strand, within PS417_07515 at 1651.787 kb on + strand, within PS417_07515 at 1651.788 kb on - strand, within PS417_07515 at 1651.788 kb on - strand, within PS417_07515 at 1651.788 kb on - strand, within PS417_07515 at 1651.795 kb on - strand, within PS417_07515 at 1651.892 kb on + strand, within PS417_07515 at 1651.893 kb on - strand, within PS417_07515 at 1651.935 kb on - strand, within PS417_07515 at 1652.093 kb on + strand, within PS417_07515 at 1652.093 kb on + strand, within PS417_07515 at 1652.093 kb on + strand, within PS417_07515 at 1652.093 kb on + strand, within PS417_07515 at 1652.094 kb on - strand, within PS417_07515 at 1652.094 kb on - strand, within PS417_07515 at 1652.094 kb on - strand, within PS417_07515 at 1652.094 kb on - strand, within PS417_07515 at 1652.117 kb on + strand, within PS417_07515 at 1652.117 kb on + strand, within PS417_07515 at 1652.118 kb on - strand, within PS417_07515 at 1652.181 kb on - strand, within PS417_07515 at 1652.261 kb on + strand, within PS417_07515 at 1652.336 kb on + strand, within PS417_07515 at 1652.490 kb on + strand, within PS417_07515 at 1652.546 kb on + strand, within PS417_07515 at 1652.570 kb on + strand, within PS417_07515 at 1652.570 kb on + strand at 1652.570 kb on + strand, within PS417_07515 at 1652.570 kb on + strand, within PS417_07515 at 1652.571 kb on - strand, within PS417_07515 at 1652.574 kb on - strand, within PS417_07515 at 1652.574 kb on - strand, within PS417_07515 at 1652.750 kb on + strand, within PS417_07515 at 1652.771 kb on + strand, within PS417_07515 at 1652.771 kb on + strand, within PS417_07515 at 1653.038 kb on + strand, within PS417_07515 at 1653.039 kb on - strand, within PS417_07515 at 1653.039 kb on - strand, within PS417_07515 at 1653.089 kb on + strand, within PS417_07515 at 1653.461 kb on + strand, within PS417_07515 at 1653.506 kb on + strand, within PS417_07515 at 1653.596 kb on + strand, within PS417_07515 at 1653.597 kb on - strand, within PS417_07515 at 1653.597 kb on - strand, within PS417_07515 at 1653.597 kb on - strand, within PS417_07515 at 1653.785 kb on - strand, within PS417_07515 at 1654.001 kb on + strand at 1654.001 kb on + strand at 1654.001 kb on + strand at 1654.002 kb on - strand at 1654.002 kb on - strand at 1654.007 kb on + strand at 1654.007 kb on + strand at 1654.014 kb on + strand at 1654.015 kb on - strand at 1654.036 kb on - strand at 1654.036 kb on - strand at 1654.036 kb on - strand at 1654.119 kb on + strand at 1654.120 kb on - strand at 1654.128 kb on - strand at 1654.128 kb on - strand at 1654.128 kb on - strand at 1654.151 kb on - strand at 1654.164 kb on + strand at 1654.164 kb on + strand at 1654.165 kb on - strand at 1654.170 kb on + strand at 1654.170 kb on + strand at 1654.171 kb on - strand at 1654.271 kb on + strand at 1654.271 kb on + strand at 1655.028 kb on - strand, within PS417_07520
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; solid stress remove 1,650,377 + PS417_07510 0.19 -0.5 1,650,470 + PS417_07510 0.29 +0.3 1,650,542 + PS417_07510 0.37 +0.4 1,650,543 - PS417_07510 0.37 -0.1 1,650,543 - PS417_07510 0.37 -0.3 1,650,748 + PS417_07510 0.59 -0.7 1,650,771 - PS417_07510 0.61 +0.9 1,650,812 + -1.4 1,650,992 + PS417_07510 0.85 +0.2 1,650,992 + PS417_07510 0.85 +0.4 1,651,160 + +0.7 1,651,160 + -0.2 1,651,160 + +0.1 1,651,251 + -0.4 1,651,251 + -1.2 1,651,252 - -0.3 1,651,298 - -0.1 1,651,313 + -0.1 1,651,325 + -0.1 1,651,325 + -0.7 1,651,325 + -0.5 1,651,326 - -0.5 1,651,352 + -0.0 1,651,353 - +1.5 1,651,379 + -0.3 1,651,380 - -1.2 1,651,380 - -0.5 1,651,432 - -0.5 1,651,739 + PS417_07515 0.15 +0.0 1,651,740 - PS417_07515 0.15 -1.9 1,651,740 - PS417_07515 0.15 -0.6 1,651,757 + PS417_07515 0.16 -0.4 1,651,757 + PS417_07515 0.16 -0.6 1,651,787 + PS417_07515 0.17 -0.6 1,651,787 + PS417_07515 0.17 -0.6 1,651,787 + PS417_07515 0.17 +0.5 1,651,788 - PS417_07515 0.17 -0.6 1,651,788 - PS417_07515 0.17 +0.0 1,651,788 - PS417_07515 0.17 -0.4 1,651,795 - PS417_07515 0.17 -1.1 1,651,892 + PS417_07515 0.21 -1.1 1,651,893 - PS417_07515 0.21 -0.1 1,651,935 - PS417_07515 0.22 -0.8 1,652,093 + PS417_07515 0.28 -0.5 1,652,093 + PS417_07515 0.28 -0.6 1,652,093 + PS417_07515 0.28 -0.4 1,652,093 + PS417_07515 0.28 -1.1 1,652,094 - PS417_07515 0.28 +0.8 1,652,094 - PS417_07515 0.28 -0.7 1,652,094 - PS417_07515 0.28 -3.1 1,652,094 - PS417_07515 0.28 -0.7 1,652,117 + PS417_07515 0.29 -0.4 1,652,117 + PS417_07515 0.29 -0.3 1,652,118 - PS417_07515 0.29 -1.4 1,652,181 - PS417_07515 0.31 -0.7 1,652,261 + PS417_07515 0.34 +0.3 1,652,336 + PS417_07515 0.37 -0.9 1,652,490 + PS417_07515 0.43 -1.3 1,652,546 + PS417_07515 0.45 +0.5 1,652,570 + PS417_07515 0.45 -0.9 1,652,570 + -0.7 1,652,570 + PS417_07515 0.45 -0.6 1,652,570 + PS417_07515 0.45 +0.3 1,652,571 - PS417_07515 0.45 -0.4 1,652,574 - PS417_07515 0.46 -1.1 1,652,574 - PS417_07515 0.46 +0.2 1,652,750 + PS417_07515 0.52 -0.5 1,652,771 + PS417_07515 0.53 -1.1 1,652,771 + PS417_07515 0.53 -0.1 1,653,038 + PS417_07515 0.63 +0.5 1,653,039 - PS417_07515 0.63 -0.7 1,653,039 - PS417_07515 0.63 -0.5 1,653,089 + PS417_07515 0.64 +0.6 1,653,461 + PS417_07515 0.78 -0.2 1,653,506 + PS417_07515 0.80 -1.8 1,653,596 + PS417_07515 0.83 -0.4 1,653,597 - PS417_07515 0.83 -0.4 1,653,597 - PS417_07515 0.83 +0.3 1,653,597 - PS417_07515 0.83 -0.1 1,653,785 - PS417_07515 0.90 -0.5 1,654,001 + -0.3 1,654,001 + -0.1 1,654,001 + -0.9 1,654,002 - +0.7 1,654,002 - -0.4 1,654,007 + +0.3 1,654,007 + -1.0 1,654,014 + -0.7 1,654,015 - -0.8 1,654,036 - -1.4 1,654,036 - -0.2 1,654,036 - -0.8 1,654,119 + -1.1 1,654,120 - -0.7 1,654,128 - -0.0 1,654,128 - +0.2 1,654,128 - +0.2 1,654,151 - +0.9 1,654,164 + -0.5 1,654,164 + -0.7 1,654,165 - -0.6 1,654,170 + +1.1 1,654,170 + -0.3 1,654,171 - -0.4 1,654,271 + -0.5 1,654,271 + +0.2 1,655,028 - PS417_07520 0.72 +0.7
Or see this region's nucleotide sequence