Experiment: Fraxetin 0.5 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11310 and PS417_11315 are separated by 183 nucleotides PS417_11315 and PS417_11320 are separated by 75 nucleotides
PS417_11310: PS417_11310 - alkaline phosphatase, at 2,422,420 to 2,423,601
_11310
PS417_11315: PS417_11315 - hemagglutinin, at 2,423,785 to 2,436,357
_11315
PS417_11320: PS417_11320 - hypothetical protein, at 2,436,433 to 2,438,019
_11320
Position (kb)
2423
2424
2425
2426
2427
2428
2429
2430
2431
2432
2433
2434
2435
2436
2437 Strain fitness (log2 ratio)
-1
0
1
2 at 2423.104 kb on + strand, within PS417_11310 at 2423.105 kb on - strand, within PS417_11310 at 2423.735 kb on + strand at 2424.529 kb on + strand at 2424.588 kb on - strand at 2424.687 kb on + strand at 2424.736 kb on + strand at 2425.690 kb on + strand, within PS417_11315 at 2425.690 kb on + strand, within PS417_11315 at 2425.735 kb on + strand, within PS417_11315 at 2425.783 kb on + strand, within PS417_11315 at 2425.784 kb on - strand, within PS417_11315 at 2425.787 kb on - strand, within PS417_11315 at 2425.787 kb on - strand at 2425.867 kb on - strand, within PS417_11315 at 2426.012 kb on - strand, within PS417_11315 at 2426.724 kb on + strand, within PS417_11315 at 2426.730 kb on - strand, within PS417_11315 at 2426.730 kb on - strand, within PS417_11315 at 2426.962 kb on + strand, within PS417_11315 at 2427.323 kb on - strand at 2427.461 kb on + strand, within PS417_11315 at 2427.539 kb on - strand, within PS417_11315 at 2427.539 kb on - strand, within PS417_11315 at 2427.622 kb on + strand, within PS417_11315 at 2427.985 kb on + strand, within PS417_11315 at 2427.985 kb on + strand, within PS417_11315 at 2427.986 kb on - strand, within PS417_11315 at 2428.257 kb on + strand, within PS417_11315 at 2428.618 kb on + strand, within PS417_11315 at 2428.618 kb on + strand, within PS417_11315 at 2428.618 kb on + strand, within PS417_11315 at 2429.006 kb on - strand, within PS417_11315 at 2429.006 kb on - strand, within PS417_11315 at 2429.027 kb on - strand, within PS417_11315 at 2429.743 kb on + strand, within PS417_11315 at 2429.744 kb on - strand, within PS417_11315 at 2429.744 kb on - strand, within PS417_11315 at 2429.763 kb on + strand, within PS417_11315 at 2429.764 kb on - strand, within PS417_11315 at 2429.764 kb on - strand, within PS417_11315 at 2429.764 kb on - strand, within PS417_11315 at 2430.199 kb on + strand, within PS417_11315 at 2430.199 kb on + strand, within PS417_11315 at 2430.199 kb on + strand, within PS417_11315 at 2430.199 kb on + strand, within PS417_11315 at 2430.603 kb on + strand, within PS417_11315 at 2431.684 kb on + strand, within PS417_11315 at 2431.855 kb on + strand, within PS417_11315 at 2431.855 kb on + strand, within PS417_11315 at 2431.957 kb on + strand, within PS417_11315 at 2431.996 kb on - strand, within PS417_11315 at 2431.996 kb on - strand, within PS417_11315 at 2432.000 kb on - strand, within PS417_11315 at 2432.000 kb on - strand, within PS417_11315 at 2432.052 kb on + strand, within PS417_11315 at 2432.053 kb on - strand, within PS417_11315 at 2432.053 kb on - strand, within PS417_11315 at 2432.217 kb on + strand, within PS417_11315 at 2432.222 kb on - strand, within PS417_11315 at 2432.222 kb on - strand, within PS417_11315 at 2432.469 kb on + strand at 2432.522 kb on + strand, within PS417_11315 at 2432.649 kb on - strand, within PS417_11315 at 2432.968 kb on + strand, within PS417_11315 at 2432.989 kb on + strand, within PS417_11315 at 2432.990 kb on - strand, within PS417_11315 at 2432.990 kb on - strand, within PS417_11315 at 2433.004 kb on + strand, within PS417_11315 at 2433.005 kb on - strand, within PS417_11315 at 2433.128 kb on - strand, within PS417_11315 at 2433.307 kb on + strand, within PS417_11315 at 2433.307 kb on + strand, within PS417_11315 at 2433.418 kb on + strand, within PS417_11315 at 2433.418 kb on + strand, within PS417_11315 at 2433.747 kb on - strand, within PS417_11315 at 2433.947 kb on + strand, within PS417_11315 at 2434.012 kb on + strand, within PS417_11315 at 2434.013 kb on - strand, within PS417_11315 at 2434.013 kb on - strand, within PS417_11315 at 2434.013 kb on - strand, within PS417_11315 at 2434.013 kb on - strand, within PS417_11315 at 2434.013 kb on - strand, within PS417_11315 at 2434.058 kb on - strand, within PS417_11315 at 2434.058 kb on - strand, within PS417_11315 at 2434.435 kb on + strand at 2434.436 kb on - strand, within PS417_11315 at 2434.436 kb on - strand, within PS417_11315 at 2434.436 kb on - strand, within PS417_11315 at 2434.442 kb on - strand, within PS417_11315 at 2434.452 kb on - strand, within PS417_11315 at 2435.236 kb on - strand at 2435.323 kb on + strand at 2435.327 kb on - strand at 2435.407 kb on + strand at 2435.407 kb on + strand at 2435.440 kb on + strand at 2435.509 kb on + strand at 2435.647 kb on - strand at 2435.674 kb on + strand at 2435.674 kb on + strand at 2435.797 kb on + strand at 2435.797 kb on + strand at 2435.797 kb on + strand at 2435.797 kb on + strand at 2435.819 kb on - strand at 2436.743 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 0.5 mM; solid stress remove 2,423,104 + PS417_11310 0.58 -0.1 2,423,105 - PS417_11310 0.58 +0.2 2,423,735 + -0.2 2,424,529 + +0.0 2,424,588 - +0.0 2,424,687 + +0.2 2,424,736 + +0.4 2,425,690 + PS417_11315 0.15 -0.1 2,425,690 + PS417_11315 0.15 +0.4 2,425,735 + PS417_11315 0.16 -1.2 2,425,783 + PS417_11315 0.16 -0.3 2,425,784 - PS417_11315 0.16 -0.6 2,425,787 - PS417_11315 0.16 +0.5 2,425,787 - +0.7 2,425,867 - PS417_11315 0.17 +0.0 2,426,012 - PS417_11315 0.18 +0.3 2,426,724 + PS417_11315 0.23 +0.3 2,426,730 - PS417_11315 0.23 -1.2 2,426,730 - PS417_11315 0.23 +0.1 2,426,962 + PS417_11315 0.25 +0.3 2,427,323 - -0.8 2,427,461 + PS417_11315 0.29 -0.1 2,427,539 - PS417_11315 0.30 -0.1 2,427,539 - PS417_11315 0.30 +0.0 2,427,622 + PS417_11315 0.31 +0.8 2,427,985 + PS417_11315 0.33 -0.2 2,427,985 + PS417_11315 0.33 +1.1 2,427,986 - PS417_11315 0.33 +0.6 2,428,257 + PS417_11315 0.36 -0.4 2,428,618 + PS417_11315 0.38 -0.5 2,428,618 + PS417_11315 0.38 +0.4 2,428,618 + PS417_11315 0.38 -0.8 2,429,006 - PS417_11315 0.42 +0.4 2,429,006 - PS417_11315 0.42 -1.3 2,429,027 - PS417_11315 0.42 -0.0 2,429,743 + PS417_11315 0.47 -0.5 2,429,744 - PS417_11315 0.47 +2.0 2,429,744 - PS417_11315 0.47 +0.5 2,429,763 + PS417_11315 0.48 +0.3 2,429,764 - PS417_11315 0.48 -1.0 2,429,764 - PS417_11315 0.48 -0.4 2,429,764 - PS417_11315 0.48 +1.0 2,430,199 + PS417_11315 0.51 -0.5 2,430,199 + PS417_11315 0.51 +0.0 2,430,199 + PS417_11315 0.51 -0.8 2,430,199 + PS417_11315 0.51 +0.3 2,430,603 + PS417_11315 0.54 -0.3 2,431,684 + PS417_11315 0.63 -1.0 2,431,855 + PS417_11315 0.64 -0.1 2,431,855 + PS417_11315 0.64 +0.3 2,431,957 + PS417_11315 0.65 +1.2 2,431,996 - PS417_11315 0.65 +0.7 2,431,996 - PS417_11315 0.65 +0.5 2,432,000 - PS417_11315 0.65 +1.3 2,432,000 - PS417_11315 0.65 +0.5 2,432,052 + PS417_11315 0.66 +0.6 2,432,053 - PS417_11315 0.66 +0.7 2,432,053 - PS417_11315 0.66 +0.6 2,432,217 + PS417_11315 0.67 +1.3 2,432,222 - PS417_11315 0.67 +0.7 2,432,222 - PS417_11315 0.67 +1.6 2,432,469 + -1.4 2,432,522 + PS417_11315 0.69 -0.0 2,432,649 - PS417_11315 0.71 +0.9 2,432,968 + PS417_11315 0.73 +0.1 2,432,989 + PS417_11315 0.73 +0.1 2,432,990 - PS417_11315 0.73 +0.1 2,432,990 - PS417_11315 0.73 +1.0 2,433,004 + PS417_11315 0.73 -0.4 2,433,005 - PS417_11315 0.73 +0.5 2,433,128 - PS417_11315 0.74 -0.1 2,433,307 + PS417_11315 0.76 +1.1 2,433,307 + PS417_11315 0.76 -0.5 2,433,418 + PS417_11315 0.77 +0.2 2,433,418 + PS417_11315 0.77 +0.2 2,433,747 - PS417_11315 0.79 -0.6 2,433,947 + PS417_11315 0.81 -1.5 2,434,012 + PS417_11315 0.81 +1.3 2,434,013 - PS417_11315 0.81 +0.4 2,434,013 - PS417_11315 0.81 -0.7 2,434,013 - PS417_11315 0.81 -0.2 2,434,013 - PS417_11315 0.81 +0.1 2,434,013 - PS417_11315 0.81 -0.3 2,434,058 - PS417_11315 0.82 -0.2 2,434,058 - PS417_11315 0.82 -0.8 2,434,435 + +0.5 2,434,436 - PS417_11315 0.85 +0.5 2,434,436 - PS417_11315 0.85 +0.5 2,434,436 - PS417_11315 0.85 +0.0 2,434,442 - PS417_11315 0.85 -0.1 2,434,452 - PS417_11315 0.85 +0.4 2,435,236 - -0.2 2,435,323 + +0.6 2,435,327 - -0.1 2,435,407 + +0.1 2,435,407 + +0.0 2,435,440 + -0.4 2,435,509 + -0.0 2,435,647 - -0.1 2,435,674 + +0.7 2,435,674 + +0.2 2,435,797 + -0.4 2,435,797 + -0.6 2,435,797 + -0.5 2,435,797 + +0.4 2,435,819 - -0.4 2,436,743 + +1.7
Or see this region's nucleotide sequence