Experiment: Fraxetin 1 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16680 and PS417_16685 are separated by 46 nucleotides PS417_16685 and PS417_16690 are separated by 86 nucleotides PS417_16690 and PS417_16695 overlap by 8 nucleotides
PS417_16680: PS417_16680 - MFS transporter, at 3,641,678 to 3,642,808
_16680
PS417_16685: PS417_16685 - multidrug MFS transporter, at 3,642,855 to 3,644,219
_16685
PS417_16690: PS417_16690 - hypothetical protein, at 3,644,306 to 3,644,758
_16690
PS417_16695: PS417_16695 - hypothetical protein, at 3,644,751 to 3,645,500
_16695
Position (kb)
3642
3643
3644
3645 Strain fitness (log2 ratio)
-2
-1
0
1 at 3641.949 kb on + strand, within PS417_16680 at 3641.949 kb on + strand, within PS417_16680 at 3642.600 kb on + strand, within PS417_16680 at 3642.718 kb on - strand at 3642.853 kb on - strand at 3642.886 kb on - strand at 3643.326 kb on - strand, within PS417_16685 at 3643.763 kb on + strand, within PS417_16685 at 3643.763 kb on + strand, within PS417_16685 at 3643.764 kb on - strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.791 kb on - strand, within PS417_16685 at 3643.791 kb on - strand, within PS417_16685 at 3643.792 kb on + strand, within PS417_16685 at 3643.793 kb on - strand, within PS417_16685 at 3643.829 kb on + strand, within PS417_16685 at 3643.830 kb on - strand, within PS417_16685 at 3644.044 kb on + strand, within PS417_16685 at 3644.045 kb on - strand, within PS417_16685 at 3644.301 kb on + strand at 3644.477 kb on - strand, within PS417_16690 at 3644.804 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 1 mM; liquid stress remove 3,641,949 + PS417_16680 0.24 +0.5 3,641,949 + PS417_16680 0.24 +1.7 3,642,600 + PS417_16680 0.82 -0.2 3,642,718 - -0.6 3,642,853 - -0.2 3,642,886 - -0.2 3,643,326 - PS417_16685 0.35 +0.1 3,643,763 + PS417_16685 0.67 +0.2 3,643,763 + PS417_16685 0.67 -0.2 3,643,764 - PS417_16685 0.67 -0.4 3,643,790 + PS417_16685 0.68 -0.7 3,643,790 + PS417_16685 0.68 -0.9 3,643,790 + PS417_16685 0.68 -1.0 3,643,791 - PS417_16685 0.69 -1.0 3,643,791 - PS417_16685 0.69 -0.4 3,643,792 + PS417_16685 0.69 -0.5 3,643,793 - PS417_16685 0.69 -0.7 3,643,829 + PS417_16685 0.71 -0.5 3,643,830 - PS417_16685 0.71 -0.2 3,644,044 + PS417_16685 0.87 -2.1 3,644,045 - PS417_16685 0.87 -1.0 3,644,301 + -0.1 3,644,477 - PS417_16690 0.38 +0.3 3,644,804 - -0.4
Or see this region's nucleotide sequence