Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27145 and PS417_27150 are separated by 109 nucleotides PS417_27150 and PS417_27155 are separated by 28 nucleotides PS417_27155 and PS417_27160 overlap by 4 nucleotides PS417_27160 and PS417_27165 are separated by 9 nucleotides
PS417_27145: PS417_27145 - TetR family transcriptional regulator, at 5,861,547 to 5,862,188
_27145
PS417_27150: PS417_27150 - transporter, at 5,862,298 to 5,862,513
_27150
PS417_27155: PS417_27155 - aliphatic sulfonates transport ATP-binding subunit, at 5,862,542 to 5,863,348
_27155
PS417_27160: PS417_27160 - alkanesulfonate transporter permease subunit, at 5,863,345 to 5,864,133
_27160
PS417_27165: PS417_27165 - alkanesulfonate monooxygenase, at 5,864,143 to 5,865,291
_27165
Position (kb)
5862
5863
5864 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5861.668 kb on - strand, within PS417_27145 at 5861.709 kb on + strand, within PS417_27145 at 5861.835 kb on + strand, within PS417_27145 at 5861.836 kb on - strand, within PS417_27145 at 5861.836 kb on - strand, within PS417_27145 at 5861.861 kb on + strand, within PS417_27145 at 5861.861 kb on + strand, within PS417_27145 at 5861.862 kb on - strand, within PS417_27145 at 5861.862 kb on - strand, within PS417_27145 at 5861.865 kb on + strand, within PS417_27145 at 5861.865 kb on + strand, within PS417_27145 at 5861.865 kb on + strand, within PS417_27145 at 5861.865 kb on + strand, within PS417_27145 at 5861.865 kb on + strand, within PS417_27145 at 5861.866 kb on - strand, within PS417_27145 at 5861.866 kb on - strand, within PS417_27145 at 5861.866 kb on - strand, within PS417_27145 at 5861.866 kb on - strand, within PS417_27145 at 5861.866 kb on - strand, within PS417_27145 at 5862.061 kb on - strand, within PS417_27145 at 5862.092 kb on + strand, within PS417_27145 at 5862.135 kb on + strand at 5862.135 kb on + strand at 5862.135 kb on + strand at 5862.135 kb on + strand at 5862.136 kb on - strand at 5862.136 kb on - strand at 5862.136 kb on - strand at 5862.136 kb on - strand at 5862.136 kb on - strand at 5862.147 kb on + strand at 5862.147 kb on + strand at 5862.147 kb on + strand at 5862.159 kb on + strand at 5862.160 kb on - strand at 5862.160 kb on - strand at 5862.160 kb on - strand at 5862.186 kb on + strand at 5862.187 kb on - strand at 5862.187 kb on - strand at 5862.196 kb on - strand at 5862.498 kb on + strand at 5862.499 kb on - strand at 5862.499 kb on - strand at 5862.499 kb on - strand at 5862.499 kb on - strand at 5862.504 kb on + strand at 5862.505 kb on - strand at 5862.505 kb on - strand at 5862.505 kb on - strand at 5862.508 kb on - strand at 5862.508 kb on - strand at 5862.543 kb on + strand at 5862.543 kb on + strand at 5862.544 kb on - strand at 5863.025 kb on - strand, within PS417_27155 at 5863.240 kb on + strand, within PS417_27155 at 5863.448 kb on + strand, within PS417_27160 at 5863.448 kb on + strand, within PS417_27160 at 5863.449 kb on - strand, within PS417_27160 at 5863.449 kb on - strand, within PS417_27160 at 5863.449 kb on - strand, within PS417_27160 at 5863.658 kb on + strand, within PS417_27160 at 5863.658 kb on + strand, within PS417_27160 at 5863.659 kb on - strand, within PS417_27160 at 5863.709 kb on + strand, within PS417_27160 at 5863.710 kb on - strand, within PS417_27160 at 5863.721 kb on + strand, within PS417_27160 at 5864.029 kb on - strand, within PS417_27160 at 5864.080 kb on + strand at 5864.080 kb on + strand at 5864.080 kb on + strand at 5864.080 kb on + strand at 5864.081 kb on - strand at 5864.081 kb on - strand at 5864.126 kb on + strand at 5864.126 kb on + strand at 5864.126 kb on + strand at 5864.127 kb on - strand at 5864.144 kb on + strand at 5864.144 kb on + strand at 5864.145 kb on - strand at 5864.207 kb on + strand at 5864.207 kb on + strand at 5864.208 kb on - strand at 5864.208 kb on - strand at 5864.310 kb on + strand, within PS417_27165 at 5864.310 kb on + strand, within PS417_27165 at 5864.311 kb on - strand, within PS417_27165
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 5,861,668 - PS417_27145 0.19 +1.4 5,861,709 + PS417_27145 0.25 -0.3 5,861,835 + PS417_27145 0.45 +0.4 5,861,836 - PS417_27145 0.45 -0.2 5,861,836 - PS417_27145 0.45 -0.5 5,861,861 + PS417_27145 0.49 +0.3 5,861,861 + PS417_27145 0.49 -0.2 5,861,862 - PS417_27145 0.49 +2.2 5,861,862 - PS417_27145 0.49 -0.9 5,861,865 + PS417_27145 0.50 -0.4 5,861,865 + PS417_27145 0.50 -0.9 5,861,865 + PS417_27145 0.50 -0.9 5,861,865 + PS417_27145 0.50 -0.7 5,861,865 + PS417_27145 0.50 -0.2 5,861,866 - PS417_27145 0.50 -0.2 5,861,866 - PS417_27145 0.50 -0.0 5,861,866 - PS417_27145 0.50 +0.6 5,861,866 - PS417_27145 0.50 +0.4 5,861,866 - PS417_27145 0.50 +0.5 5,862,061 - PS417_27145 0.80 -0.1 5,862,092 + PS417_27145 0.85 -0.3 5,862,135 + +0.7 5,862,135 + -0.6 5,862,135 + -0.1 5,862,135 + -0.6 5,862,136 - -0.3 5,862,136 - +0.3 5,862,136 - +0.6 5,862,136 - -0.5 5,862,136 - +0.6 5,862,147 + +0.4 5,862,147 + +1.8 5,862,147 + -0.2 5,862,159 + -0.0 5,862,160 - +0.2 5,862,160 - +1.2 5,862,160 - +0.4 5,862,186 + -1.5 5,862,187 - -0.1 5,862,187 - -0.1 5,862,196 - +0.1 5,862,498 + -0.3 5,862,499 - +0.0 5,862,499 - -0.3 5,862,499 - -0.6 5,862,499 - +0.6 5,862,504 + -0.1 5,862,505 - -0.0 5,862,505 - +0.5 5,862,505 - +0.0 5,862,508 - -0.2 5,862,508 - -0.6 5,862,543 + +0.1 5,862,543 + +0.4 5,862,544 - -0.5 5,863,025 - PS417_27155 0.60 -0.2 5,863,240 + PS417_27155 0.86 -1.0 5,863,448 + PS417_27160 0.13 +0.3 5,863,448 + PS417_27160 0.13 -0.5 5,863,449 - PS417_27160 0.13 +0.0 5,863,449 - PS417_27160 0.13 +1.6 5,863,449 - PS417_27160 0.13 -1.4 5,863,658 + PS417_27160 0.40 -0.0 5,863,658 + PS417_27160 0.40 +0.8 5,863,659 - PS417_27160 0.40 +0.3 5,863,709 + PS417_27160 0.46 +0.0 5,863,710 - PS417_27160 0.46 -1.1 5,863,721 + PS417_27160 0.48 -0.2 5,864,029 - PS417_27160 0.87 +0.9 5,864,080 + +1.3 5,864,080 + +0.1 5,864,080 + -0.0 5,864,080 + -0.0 5,864,081 - +0.7 5,864,081 - +1.2 5,864,126 + -0.6 5,864,126 + +2.3 5,864,126 + -1.8 5,864,127 - -0.5 5,864,144 + +0.9 5,864,144 + -0.2 5,864,145 - +0.7 5,864,207 + -1.3 5,864,207 + +0.6 5,864,208 - +0.2 5,864,208 - -0.2 5,864,310 + PS417_27165 0.15 -0.3 5,864,310 + PS417_27165 0.15 +1.1 5,864,311 - PS417_27165 0.15 -0.1
Or see this region's nucleotide sequence