Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24380 and PS417_24385 overlap by 4 nucleotides PS417_24385 and PS417_24390 are separated by 97 nucleotides
PS417_24380: PS417_24380 - guanine permease, at 5,291,624 to 5,292,919
_24380
PS417_24385: PS417_24385 - tRNA (uracil-5-)-methyltransferase, at 5,292,916 to 5,293,995
_24385
PS417_24390: PS417_24390 - peptidase, at 5,294,093 to 5,295,409
_24390
Position (kb) 5292
5293
5294 Strain fitness (log2 ratio) -2
-1
0
1 at 5292.481 kb on + strand, within PS417_24380 at 5292.482 kb on - strand, within PS417_24380 at 5292.530 kb on + strand, within PS417_24380 at 5292.531 kb on - strand, within PS417_24380 at 5292.971 kb on + strand at 5292.971 kb on + strand at 5293.393 kb on + strand, within PS417_24385 at 5293.394 kb on - strand, within PS417_24385 at 5293.504 kb on + strand, within PS417_24385 at 5293.807 kb on - strand, within PS417_24385 at 5293.807 kb on - strand, within PS417_24385 at 5293.855 kb on + strand, within PS417_24385 at 5293.855 kb on + strand, within PS417_24385 at 5293.855 kb on + strand, within PS417_24385 at 5293.856 kb on - strand, within PS417_24385 at 5293.856 kb on - strand, within PS417_24385 at 5293.962 kb on + strand at 5294.094 kb on + strand at 5294.095 kb on - strand at 5294.160 kb on + strand at 5294.161 kb on - strand at 5294.187 kb on + strand at 5294.187 kb on + strand at 5294.187 kb on + strand at 5294.188 kb on - strand at 5294.334 kb on + strand, within PS417_24390 at 5294.334 kb on + strand, within PS417_24390 at 5294.334 kb on + strand, within PS417_24390 at 5294.424 kb on + strand, within PS417_24390 at 5294.424 kb on + strand, within PS417_24390 at 5294.519 kb on - strand, within PS417_24390 at 5294.541 kb on + strand, within PS417_24390 at 5294.541 kb on + strand, within PS417_24390 at 5294.542 kb on - strand, within PS417_24390 at 5294.542 kb on - strand at 5294.584 kb on - strand, within PS417_24390 at 5294.632 kb on - strand, within PS417_24390 at 5294.732 kb on + strand, within PS417_24390 at 5294.732 kb on + strand, within PS417_24390 at 5294.912 kb on + strand, within PS417_24390
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 5,292,481 + PS417_24380 0.66 -0.6 5,292,482 - PS417_24380 0.66 -0.9 5,292,530 + PS417_24380 0.70 -0.2 5,292,531 - PS417_24380 0.70 -0.4 5,292,971 + -1.0 5,292,971 + +0.7 5,293,393 + PS417_24385 0.44 -1.2 5,293,394 - PS417_24385 0.44 -0.4 5,293,504 + PS417_24385 0.54 -0.8 5,293,807 - PS417_24385 0.82 -0.7 5,293,807 - PS417_24385 0.82 -2.1 5,293,855 + PS417_24385 0.87 +1.0 5,293,855 + PS417_24385 0.87 -2.1 5,293,855 + PS417_24385 0.87 -0.6 5,293,856 - PS417_24385 0.87 +1.0 5,293,856 - PS417_24385 0.87 -1.3 5,293,962 + +0.2 5,294,094 + -0.5 5,294,095 - -0.9 5,294,160 + +0.3 5,294,161 - -0.3 5,294,187 + -1.1 5,294,187 + -1.0 5,294,187 + +0.2 5,294,188 - -0.2 5,294,334 + PS417_24390 0.18 -0.9 5,294,334 + PS417_24390 0.18 +0.0 5,294,334 + PS417_24390 0.18 +0.8 5,294,424 + PS417_24390 0.25 -1.1 5,294,424 + PS417_24390 0.25 -0.3 5,294,519 - PS417_24390 0.32 -0.5 5,294,541 + PS417_24390 0.34 +0.3 5,294,541 + PS417_24390 0.34 +0.1 5,294,542 - PS417_24390 0.34 +0.4 5,294,542 - +0.4 5,294,584 - PS417_24390 0.37 +0.2 5,294,632 - PS417_24390 0.41 +0.2 5,294,732 + PS417_24390 0.49 -0.4 5,294,732 + PS417_24390 0.49 -0.4 5,294,912 + PS417_24390 0.62 -0.5
Or see this region's nucleotide sequence