Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23945 and PS417_23950 are separated by 295 nucleotides PS417_23950 and PS417_23955 are separated by 195 nucleotides PS417_23955 and PS417_23960 are separated by 115 nucleotides
PS417_23945: PS417_23945 - ornithine aminotransferase, at 5,185,381 to 5,186,001
_23945
PS417_23950: PS417_23950 - polynucleotide phosphorylase/polyadenylase, at 5,186,297 to 5,188,402
_23950
PS417_23955: PS417_23955 - 30S ribosomal protein S15, at 5,188,598 to 5,188,867
_23955
PS417_23960: PS417_23960 - pseudouridine synthase, at 5,188,983 to 5,189,900
_23960
Position (kb)
5186
5187
5188
5189 Strain fitness (log2 ratio)
-1
0
1
2 at 5185.334 kb on + strand at 5185.334 kb on + strand at 5185.334 kb on + strand at 5185.334 kb on + strand at 5185.334 kb on + strand at 5185.334 kb on + strand at 5185.334 kb on + strand at 5185.335 kb on - strand at 5185.345 kb on - strand at 5185.498 kb on + strand, within PS417_23945 at 5185.499 kb on - strand, within PS417_23945 at 5185.524 kb on + strand, within PS417_23945 at 5185.693 kb on + strand, within PS417_23945 at 5185.693 kb on + strand, within PS417_23945 at 5185.693 kb on + strand, within PS417_23945 at 5185.721 kb on - strand, within PS417_23945 at 5185.750 kb on - strand, within PS417_23945 at 5185.750 kb on - strand, within PS417_23945 at 5185.753 kb on + strand, within PS417_23945 at 5185.753 kb on + strand, within PS417_23945 at 5185.753 kb on + strand, within PS417_23945 at 5185.753 kb on + strand at 5185.753 kb on + strand, within PS417_23945 at 5185.754 kb on - strand, within PS417_23945 at 5185.754 kb on - strand, within PS417_23945 at 5185.754 kb on - strand, within PS417_23945 at 5185.754 kb on - strand, within PS417_23945 at 5185.872 kb on + strand, within PS417_23945 at 5185.890 kb on + strand, within PS417_23945 at 5185.981 kb on - strand at 5186.001 kb on + strand at 5186.001 kb on + strand at 5186.002 kb on - strand at 5186.008 kb on - strand at 5186.008 kb on - strand at 5186.008 kb on - strand at 5186.325 kb on - strand at 5186.526 kb on + strand, within PS417_23950 at 5186.526 kb on + strand, within PS417_23950 at 5186.527 kb on - strand, within PS417_23950 at 5188.439 kb on - strand at 5188.439 kb on - strand at 5188.496 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 5,185,334 + -0.7 5,185,334 + -0.1 5,185,334 + -0.5 5,185,334 + -0.1 5,185,334 + -0.1 5,185,334 + +1.6 5,185,334 + -0.2 5,185,335 - -0.2 5,185,345 - -0.5 5,185,498 + PS417_23945 0.19 -0.6 5,185,499 - PS417_23945 0.19 -1.5 5,185,524 + PS417_23945 0.23 +0.1 5,185,693 + PS417_23945 0.50 +0.0 5,185,693 + PS417_23945 0.50 +1.0 5,185,693 + PS417_23945 0.50 +2.1 5,185,721 - PS417_23945 0.55 -0.1 5,185,750 - PS417_23945 0.59 +0.1 5,185,750 - PS417_23945 0.59 +0.2 5,185,753 + PS417_23945 0.60 +0.0 5,185,753 + PS417_23945 0.60 -0.1 5,185,753 + PS417_23945 0.60 -0.4 5,185,753 + +0.6 5,185,753 + PS417_23945 0.60 -0.5 5,185,754 - PS417_23945 0.60 +0.7 5,185,754 - PS417_23945 0.60 -0.6 5,185,754 - PS417_23945 0.60 +0.1 5,185,754 - PS417_23945 0.60 +0.1 5,185,872 + PS417_23945 0.79 -0.6 5,185,890 + PS417_23945 0.82 -0.3 5,185,981 - +0.4 5,186,001 + -0.1 5,186,001 + +0.0 5,186,002 - -0.1 5,186,008 - -0.4 5,186,008 - -0.0 5,186,008 - -0.8 5,186,325 - +0.5 5,186,526 + PS417_23950 0.11 -1.0 5,186,526 + PS417_23950 0.11 -1.5 5,186,527 - PS417_23950 0.11 +1.2 5,188,439 - +0.6 5,188,439 - +0.1 5,188,496 - +1.0
Or see this region's nucleotide sequence