Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16815 and PS417_16820 are separated by 154 nucleotides PS417_16820 and PS417_16825 are separated by 92 nucleotides PS417_16825 and PS417_16830 are separated by 210 nucleotides
PS417_16815: PS417_16815 - acyl-CoA dehydrogenase, at 3,667,467 to 3,668,663
_16815
PS417_16820: PS417_16820 - Cro/Cl family transcriptional regulator, at 3,668,818 to 3,669,381
_16820
PS417_16825: PS417_16825 - membrane protein, at 3,669,474 to 3,670,403
_16825
PS417_16830: PS417_16830 - monovalent cation/H+ antiporter subunit A, at 3,670,614 to 3,673,535
_16830
Position (kb)
3669
3670
3671 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3668.500 kb on - strand, within PS417_16815 at 3668.633 kb on + strand at 3668.772 kb on + strand at 3668.971 kb on + strand, within PS417_16820 at 3669.801 kb on + strand, within PS417_16825 at 3669.802 kb on - strand, within PS417_16825 at 3669.802 kb on - strand, within PS417_16825 at 3669.802 kb on - strand, within PS417_16825 at 3669.802 kb on - strand, within PS417_16825 at 3669.838 kb on + strand, within PS417_16825 at 3670.505 kb on + strand at 3670.579 kb on - strand at 3670.605 kb on + strand at 3670.605 kb on + strand at 3670.613 kb on + strand at 3670.613 kb on + strand at 3670.625 kb on - strand at 3670.688 kb on + strand at 3670.733 kb on + strand at 3670.896 kb on + strand at 3670.906 kb on - strand at 3670.908 kb on + strand, within PS417_16830 at 3670.908 kb on + strand, within PS417_16830 at 3670.908 kb on + strand, within PS417_16830 at 3670.909 kb on - strand, within PS417_16830 at 3670.909 kb on - strand, within PS417_16830 at 3670.909 kb on - strand, within PS417_16830 at 3670.909 kb on - strand, within PS417_16830 at 3670.909 kb on - strand, within PS417_16830 at 3671.095 kb on - strand, within PS417_16830 at 3671.095 kb on - strand, within PS417_16830 at 3671.095 kb on - strand, within PS417_16830 at 3671.175 kb on + strand, within PS417_16830 at 3671.176 kb on - strand, within PS417_16830 at 3671.341 kb on - strand, within PS417_16830
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 3,668,500 - PS417_16815 0.86 +0.8 3,668,633 + -0.3 3,668,772 + -0.5 3,668,971 + PS417_16820 0.27 -1.6 3,669,801 + PS417_16825 0.35 -1.2 3,669,802 - PS417_16825 0.35 -1.1 3,669,802 - PS417_16825 0.35 +0.5 3,669,802 - PS417_16825 0.35 -2.0 3,669,802 - PS417_16825 0.35 -0.5 3,669,838 + PS417_16825 0.39 -0.4 3,670,505 + -0.8 3,670,579 - -0.5 3,670,605 + -0.3 3,670,605 + +0.0 3,670,613 + -0.3 3,670,613 + -2.1 3,670,625 - -0.4 3,670,688 + -0.3 3,670,733 + +0.8 3,670,896 + -0.3 3,670,906 - +0.3 3,670,908 + PS417_16830 0.10 -1.0 3,670,908 + PS417_16830 0.10 -0.3 3,670,908 + PS417_16830 0.10 +0.1 3,670,909 - PS417_16830 0.10 +0.9 3,670,909 - PS417_16830 0.10 +0.5 3,670,909 - PS417_16830 0.10 -0.3 3,670,909 - PS417_16830 0.10 +0.5 3,670,909 - PS417_16830 0.10 +2.1 3,671,095 - PS417_16830 0.16 -0.5 3,671,095 - PS417_16830 0.16 -1.5 3,671,095 - PS417_16830 0.16 -0.5 3,671,175 + PS417_16830 0.19 +0.9 3,671,176 - PS417_16830 0.19 -0.1 3,671,341 - PS417_16830 0.25 -0.1
Or see this region's nucleotide sequence