Experiment: 80% Methanol 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13905 and PS417_13910 are separated by 240 nucleotides PS417_13910 and PS417_13915 are separated by 162 nucleotides
PS417_13905: PS417_13905 - chemotaxis protein CheY, at 3,054,371 to 3,057,874
_13905
PS417_13910: PS417_13910 - response regulator, at 3,058,115 to 3,058,471
_13910
PS417_13915: PS417_13915 - cell envelope protein, at 3,058,634 to 3,060,034
_13915
Position (kb)
3058
3059 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3057.160 kb on + strand, within PS417_13905 at 3057.194 kb on + strand, within PS417_13905 at 3057.304 kb on - strand, within PS417_13905 at 3057.391 kb on - strand, within PS417_13905 at 3057.473 kb on - strand, within PS417_13905 at 3057.615 kb on + strand at 3057.615 kb on + strand at 3057.757 kb on - strand at 3057.757 kb on - strand at 3057.757 kb on - strand at 3057.757 kb on - strand at 3057.967 kb on - strand at 3058.036 kb on + strand at 3058.037 kb on - strand at 3058.037 kb on - strand at 3058.048 kb on + strand at 3058.083 kb on + strand at 3058.114 kb on + strand at 3058.114 kb on + strand at 3058.114 kb on + strand at 3058.114 kb on + strand at 3058.114 kb on + strand at 3058.114 kb on + strand at 3058.115 kb on - strand at 3058.115 kb on - strand at 3058.115 kb on - strand at 3058.266 kb on + strand at 3058.470 kb on - strand at 3058.534 kb on + strand at 3058.558 kb on + strand at 3058.599 kb on - strand at 3058.599 kb on - strand at 3058.627 kb on + strand at 3058.628 kb on - strand at 3058.628 kb on - strand at 3058.751 kb on + strand at 3058.751 kb on + strand at 3058.751 kb on + strand at 3058.755 kb on + strand at 3058.755 kb on + strand at 3058.755 kb on + strand at 3058.755 kb on + strand at 3058.755 kb on + strand at 3058.755 kb on + strand at 3058.756 kb on - strand at 3058.756 kb on - strand at 3058.756 kb on - strand at 3058.756 kb on - strand at 3058.757 kb on + strand at 3058.758 kb on - strand at 3058.793 kb on + strand, within PS417_13915 at 3058.916 kb on + strand, within PS417_13915 at 3059.015 kb on + strand, within PS417_13915 at 3059.072 kb on + strand, within PS417_13915 at 3059.073 kb on - strand, within PS417_13915 at 3059.132 kb on + strand, within PS417_13915 at 3059.132 kb on + strand, within PS417_13915 at 3059.153 kb on + strand, within PS417_13915 at 3059.153 kb on + strand, within PS417_13915 at 3059.154 kb on - strand, within PS417_13915 at 3059.223 kb on - strand, within PS417_13915 at 3059.223 kb on - strand, within PS417_13915 at 3059.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 3 mM; liquid stress remove 3,057,160 + PS417_13905 0.80 -0.6 3,057,194 + PS417_13905 0.81 -0.4 3,057,304 - PS417_13905 0.84 -1.4 3,057,391 - PS417_13905 0.86 -0.5 3,057,473 - PS417_13905 0.89 -0.1 3,057,615 + +0.7 3,057,615 + +0.2 3,057,757 - +1.4 3,057,757 - -1.6 3,057,757 - -0.8 3,057,757 - -0.8 3,057,967 - -0.2 3,058,036 + -0.3 3,058,037 - -0.6 3,058,037 - -1.2 3,058,048 + -0.7 3,058,083 + -0.2 3,058,114 + +0.2 3,058,114 + -0.0 3,058,114 + +0.5 3,058,114 + +0.1 3,058,114 + +0.1 3,058,114 + -0.1 3,058,115 - -1.7 3,058,115 - +0.4 3,058,115 - +0.4 3,058,266 + +0.7 3,058,470 - -0.5 3,058,534 + +0.3 3,058,558 + +0.1 3,058,599 - +0.2 3,058,599 - +0.8 3,058,627 + -1.0 3,058,628 - -0.4 3,058,628 - -0.6 3,058,751 + +0.0 3,058,751 + +0.4 3,058,751 + -2.4 3,058,755 + -0.4 3,058,755 + -0.0 3,058,755 + -0.2 3,058,755 + -0.2 3,058,755 + -0.6 3,058,755 + -0.3 3,058,756 - +1.0 3,058,756 - -0.4 3,058,756 - -0.6 3,058,756 - -1.2 3,058,757 + +1.5 3,058,758 - -0.3 3,058,793 + PS417_13915 0.11 -1.5 3,058,916 + PS417_13915 0.20 +0.0 3,059,015 + PS417_13915 0.27 -1.2 3,059,072 + PS417_13915 0.31 -0.0 3,059,073 - PS417_13915 0.31 -1.0 3,059,132 + PS417_13915 0.36 +0.1 3,059,132 + PS417_13915 0.36 +0.9 3,059,153 + PS417_13915 0.37 -0.3 3,059,153 + PS417_13915 0.37 -0.5 3,059,154 - PS417_13915 0.37 +1.9 3,059,223 - PS417_13915 0.42 -0.3 3,059,223 - PS417_13915 0.42 -0.0 3,059,279 - +0.1
Or see this region's nucleotide sequence