Experiment: 80% Methanol 2 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04045 and PS417_04050 overlap by 1 nucleotides PS417_04050 and PS417_04055 are separated by 10 nucleotides PS417_04055 and PS417_04060 are separated by 10 nucleotides
PS417_04045: PS417_04045 - peptide ABC transporter ATP-binding protein, at 907,238 to 908,209
_04045
PS417_04050: PS417_04050 - peptide ABC transporter ATP-binding protein, at 908,209 to 909,177
_04050
PS417_04055: PS417_04055 - peptide transporter, at 909,188 to 910,099
_04055
PS417_04060: PS417_04060 - dipeptide ABC transporter, permease component <small>(from data)</small>, at 910,110 to 911,120
_04060
Position (kb) 908
909
910 Strain fitness (log2 ratio) -1
0
1
2 at 907.590 kb on + strand at 908.072 kb on + strand, within PS417_04045 at 908.170 kb on - strand at 908.306 kb on + strand, within PS417_04050 at 908.306 kb on + strand, within PS417_04050 at 908.709 kb on + strand, within PS417_04050 at 909.315 kb on + strand, within PS417_04055 at 909.365 kb on + strand, within PS417_04055 at 909.522 kb on + strand, within PS417_04055 at 909.523 kb on - strand, within PS417_04055 at 909.570 kb on + strand, within PS417_04055 at 909.570 kb on + strand, within PS417_04055 at 909.916 kb on - strand, within PS417_04055 at 909.932 kb on - strand, within PS417_04055
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; liquid stress remove 907,590 + +1.9 908,072 + PS417_04045 0.86 -0.2 908,170 - -0.1 908,306 + PS417_04050 0.10 +0.2 908,306 + PS417_04050 0.10 +0.5 908,709 + PS417_04050 0.52 +0.2 909,315 + PS417_04055 0.14 +0.5 909,365 + PS417_04055 0.19 +0.8 909,522 + PS417_04055 0.37 +0.6 909,523 - PS417_04055 0.37 -0.5 909,570 + PS417_04055 0.42 -0.3 909,570 + PS417_04055 0.42 -0.2 909,916 - PS417_04055 0.80 -0.1 909,932 - PS417_04055 0.82 -0.1
Or see this region's nucleotide sequence