Experiment: 80% Methanol 2 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02970 and PS417_02975 are separated by 24 nucleotides PS417_02975 and PS417_02980 are separated by 314 nucleotides PS417_02980 and PS417_02985 are separated by 53 nucleotides
PS417_02970: PS417_02970 - acetyl-CoA carboxylase, at 679,244 to 679,708
_02970
PS417_02975: PS417_02975 - 3-dehydroquinate dehydratase, at 679,733 to 680,188
_02975
PS417_02980: PS417_02980 - chemotaxis protein, at 680,503 to 682,464
_02980
PS417_02985: PS417_02985 - diguanylate cyclase, at 682,518 to 684,188
_02985
Position (kb) 680
681
682
683 Strain fitness (log2 ratio) -1
0
1 at 679.843 kb on - strand, within PS417_02975 at 679.952 kb on - strand, within PS417_02975 at 679.976 kb on - strand, within PS417_02975 at 680.046 kb on + strand, within PS417_02975 at 680.047 kb on - strand, within PS417_02975 at 680.267 kb on - strand at 680.418 kb on - strand at 680.418 kb on - strand at 681.356 kb on + strand, within PS417_02980 at 682.006 kb on + strand, within PS417_02980 at 682.359 kb on - strand at 682.599 kb on - strand at 682.840 kb on + strand, within PS417_02985 at 682.919 kb on + strand, within PS417_02985 at 682.919 kb on + strand, within PS417_02985 at 682.920 kb on - strand, within PS417_02985 at 683.035 kb on + strand, within PS417_02985 at 683.036 kb on - strand, within PS417_02985 at 683.209 kb on + strand, within PS417_02985 at 683.209 kb on + strand, within PS417_02985 at 683.209 kb on + strand, within PS417_02985 at 683.209 kb on + strand, within PS417_02985 at 683.209 kb on + strand, within PS417_02985 at 683.209 kb on + strand, within PS417_02985 at 683.230 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.287 kb on + strand, within PS417_02985 at 683.288 kb on - strand, within PS417_02985 at 683.288 kb on - strand, within PS417_02985 at 683.288 kb on - strand, within PS417_02985 at 683.288 kb on - strand, within PS417_02985 at 683.444 kb on - strand, within PS417_02985
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; liquid stress remove 679,843 - PS417_02975 0.24 +0.5 679,952 - PS417_02975 0.48 -1.5 679,976 - PS417_02975 0.53 -1.3 680,046 + PS417_02975 0.69 +1.2 680,047 - PS417_02975 0.69 -0.7 680,267 - -0.9 680,418 - -0.2 680,418 - +0.1 681,356 + PS417_02980 0.43 +0.4 682,006 + PS417_02980 0.77 +0.7 682,359 - -0.1 682,599 - -0.5 682,840 + PS417_02985 0.19 -1.0 682,919 + PS417_02985 0.24 +0.1 682,919 + PS417_02985 0.24 +0.0 682,920 - PS417_02985 0.24 -0.1 683,035 + PS417_02985 0.31 -0.1 683,036 - PS417_02985 0.31 -0.3 683,209 + PS417_02985 0.41 -0.8 683,209 + PS417_02985 0.41 +0.0 683,209 + PS417_02985 0.41 +0.3 683,209 + PS417_02985 0.41 -0.1 683,209 + PS417_02985 0.41 +0.2 683,209 + PS417_02985 0.41 +1.7 683,230 + PS417_02985 0.43 -0.3 683,287 + PS417_02985 0.46 +0.3 683,287 + PS417_02985 0.46 -0.4 683,287 + PS417_02985 0.46 +0.8 683,287 + PS417_02985 0.46 +0.2 683,287 + PS417_02985 0.46 +0.1 683,287 + PS417_02985 0.46 +0.1 683,287 + PS417_02985 0.46 -0.5 683,287 + PS417_02985 0.46 -0.5 683,288 - PS417_02985 0.46 -0.3 683,288 - PS417_02985 0.46 +0.4 683,288 - PS417_02985 0.46 +0.4 683,288 - PS417_02985 0.46 -0.5 683,444 - PS417_02985 0.55 -0.2
Or see this region's nucleotide sequence