Experiment: 80% Methanol 2 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12760 and PS417_12765 are separated by 54 nucleotides PS417_12765 and PS417_12770 are separated by 11 nucleotides PS417_12770 and PS417_12775 overlap by 4 nucleotides
PS417_12760: PS417_12760 - histidine kinase, at 2,787,284 to 2,789,380
_12760
PS417_12765: PS417_12765 - oxidoreductase, at 2,789,435 to 2,790,181
_12765
PS417_12770: PS417_12770 - hypothetical protein, at 2,790,193 to 2,790,477
_12770
PS417_12775: PS417_12775 - GntR family transcriptional regulator, at 2,790,474 to 2,791,883
_12775
Position (kb)
2789
2790
2791 Strain fitness (log2 ratio)
-1
0
1 at 2788.511 kb on + strand, within PS417_12760 at 2788.512 kb on - strand, within PS417_12760 at 2788.640 kb on + strand, within PS417_12760 at 2788.640 kb on + strand, within PS417_12760 at 2788.641 kb on - strand, within PS417_12760 at 2788.725 kb on + strand, within PS417_12760 at 2789.085 kb on - strand, within PS417_12760 at 2789.288 kb on + strand at 2789.289 kb on - strand at 2789.531 kb on + strand, within PS417_12765 at 2789.531 kb on + strand, within PS417_12765 at 2789.531 kb on + strand, within PS417_12765 at 2789.894 kb on + strand, within PS417_12765 at 2789.895 kb on - strand, within PS417_12765 at 2790.113 kb on - strand at 2790.194 kb on + strand at 2790.195 kb on - strand at 2790.195 kb on - strand at 2790.195 kb on - strand at 2790.202 kb on + strand at 2790.203 kb on - strand at 2790.203 kb on - strand at 2790.203 kb on - strand at 2790.203 kb on - strand at 2790.221 kb on + strand at 2790.367 kb on + strand, within PS417_12770 at 2790.368 kb on - strand, within PS417_12770 at 2790.492 kb on - strand at 2790.545 kb on - strand at 2790.545 kb on - strand at 2790.682 kb on + strand, within PS417_12775 at 2790.817 kb on + strand at 2791.033 kb on + strand, within PS417_12775 at 2791.072 kb on - strand, within PS417_12775 at 2791.072 kb on - strand, within PS417_12775 at 2791.072 kb on - strand, within PS417_12775
Per-strain Table
Position Strand Gene LocusTag Fraction 80% Methanol 2 mM; liquid stress remove 2,788,511 + PS417_12760 0.59 -0.1 2,788,512 - PS417_12760 0.59 +0.1 2,788,640 + PS417_12760 0.65 +0.0 2,788,640 + PS417_12760 0.65 -1.3 2,788,641 - PS417_12760 0.65 -0.4 2,788,725 + PS417_12760 0.69 +0.4 2,789,085 - PS417_12760 0.86 -0.6 2,789,288 + +1.0 2,789,289 - -0.4 2,789,531 + PS417_12765 0.13 -0.5 2,789,531 + PS417_12765 0.13 -0.2 2,789,531 + PS417_12765 0.13 -0.8 2,789,894 + PS417_12765 0.61 -1.5 2,789,895 - PS417_12765 0.62 -0.1 2,790,113 - +0.8 2,790,194 + +1.3 2,790,195 - +0.6 2,790,195 - +1.1 2,790,195 - +1.4 2,790,202 + -0.3 2,790,203 - -0.6 2,790,203 - -0.7 2,790,203 - +0.1 2,790,203 - -0.9 2,790,221 + -0.2 2,790,367 + PS417_12770 0.61 +0.2 2,790,368 - PS417_12770 0.61 -0.0 2,790,492 - -1.3 2,790,545 - -0.1 2,790,545 - +0.4 2,790,682 + PS417_12775 0.15 +0.4 2,790,817 + -0.6 2,791,033 + PS417_12775 0.40 -0.5 2,791,072 - PS417_12775 0.42 -0.1 2,791,072 - PS417_12775 0.42 +1.5 2,791,072 - PS417_12775 0.42 -0.4
Or see this region's nucleotide sequence