Strain Fitness in Escherichia coli BW25113 around b4415

Experiment: 22hr_mediaonly_rep1_lowinoculum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	22hr_mediaonly_rep1_lowinoculum
606,060	+	ybdK	b0581	0.51	+0.3
606,095	+	ybdK	b0581	0.54	+0.9
606,095	+	ybdK	b0581	0.54	-0.2
606,317	-	ybdK	b0581	0.74	-1.8
606,367	-	ybdK	b0581	0.79	-0.6
606,498	+				+0.3
606,506	-				+0.1
606,516	-				+0.5
606,516	-				+0.9
606,602	+				-0.7
606,621	-				-0.0
606,673	+				+0.1
606,937	+				+1.5
606,988	+	sokE	b4700	0.53	+0.4
607,102	-	hokE	b4415	0.28	-0.8
607,105	-	hokE	b4415	0.30	+0.3
607,105	-	hokE	b4415	0.30	-0.7
607,122	+	hokE	b4415	0.41	-0.1
607,185	+	hokE	b4415	0.82	+0.4
607,210	-				-1.2
607,224	+				+0.4