Strain Fitness in Escherichia coli BW25113 around b2053

Experiment: 3hr_mediaonly_rep2_lowinoculum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3hr_mediaonly_rep2_lowinoculum
2,124,282	+				-0.6
2,124,282	+				+0.4
2,124,465	+	fcl	b2052	0.22	-1.3
2,124,601	+	fcl	b2052	0.36	-0.4
2,124,630	+	fcl	b2052	0.39	-3.0
2,124,630	+	fcl	b2052	0.39	+1.1
2,124,722	-	fcl	b2052	0.49	-1.4
2,124,813	-	fcl	b2052	0.58	+1.1
2,124,848	-	fcl	b2052	0.62	-0.3
2,124,896	+	fcl	b2052	0.67	-0.9
2,124,951	+	fcl	b2052	0.73	+0.6
2,124,951	+	fcl	b2052	0.73	+0.1
2,125,046	-	fcl	b2052	0.83	+1.1
2,125,113	+	fcl	b2052	0.89	-0.2
2,125,189	+				-0.2
2,125,221	-				-0.9
2,125,556	+	gmd	b2053	0.30	-0.2
2,125,566	+	gmd	b2053	0.31	-0.3
2,125,570	+	gmd	b2053	0.31	+0.4
2,125,570	+	gmd	b2053	0.31	-0.5
2,125,643	+	gmd	b2053	0.38	+0.5
2,125,706	+	gmd	b2053	0.44	-1.8
2,125,707	-	gmd	b2053	0.44	+0.1
2,125,797	+	gmd	b2053	0.52	+0.4
2,125,797	+	gmd	b2053	0.52	-2.2
2,125,828	+	gmd	b2053	0.54	-1.0
2,125,887	+	gmd	b2053	0.60	+0.1
2,125,941	-	gmd	b2053	0.65	+0.3
2,126,048	+	gmd	b2053	0.74	-0.6
2,126,090	-	gmd	b2053	0.78	+0.5
2,126,093	-	gmd	b2053	0.78	-0.8
2,126,151	+	gmd	b2053	0.83	-1.4
2,126,181	-	gmd	b2053	0.86	-1.2
2,126,225	-	gmd	b2053	0.90	-1.3
2,126,225	-	gmd	b2053	0.90	-2.2
2,126,247	-				+0.2
2,126,247	-				+1.3
2,126,247	-				+0.1
2,126,267	+				+0.2
2,126,388	+				+0.6
2,126,398	-				-0.3
2,126,451	-				-0.1
2,126,451	-	wcaF	b2054	0.16	-2.1
2,126,456	-	wcaF	b2054	0.17	-1.9
2,126,456	-	wcaF	b2054	0.17	+0.4
2,126,498	+	wcaF	b2054	0.24	-0.9
2,126,515	+	wcaF	b2054	0.28	+0.9
2,126,550	-	wcaF	b2054	0.34	-2.1
2,126,550	-	wcaF	b2054	0.34	-0.1
2,126,562	+	wcaF	b2054	0.36	+0.4
2,126,562	-	wcaF	b2054	0.36	-3.2
2,126,562	-	wcaF	b2054	0.36	+0.7
2,126,577	+	wcaF	b2054	0.39	-1.5
2,126,577	+	wcaF	b2054	0.39	+0.9
2,126,584	-	wcaF	b2054	0.40	-1.1
2,126,587	+	wcaF	b2054	0.41	-1.3
2,126,614	+	wcaF	b2054	0.46	+0.7
2,126,616	+	wcaF	b2054	0.46	-0.8
2,126,621	+	wcaF	b2054	0.47	-4.0
2,126,629	+	wcaF	b2054	0.48	+0.3
2,126,660	-	wcaF	b2054	0.54	+1.7
2,126,681	+	wcaF	b2054	0.58	-0.5
2,126,681	+	wcaF	b2054	0.58	-1.9
2,126,914	+				+2.7
2,127,243	-	wcaE	b2055	0.42	+2.7