Strain Fitness in Escherichia coli BW25113 around b2034

Experiment: 3hr_mediaonly_rep2_lowinoculum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3hr_mediaonly_rep2_lowinoculum
2,102,134	-	wbbK	b2032	0.64	+1.7
2,102,134	-	wbbK	b2032	0.64	-0.8
2,102,166	-	wbbK	b2032	0.67	-1.9
2,102,166	-	wbbK	b2032	0.67	+1.4
2,102,211	-	wbbK	b2032	0.71	-0.2
2,102,211	-	wbbK	b2032	0.71	-1.2
2,102,211	-	wbbK	b2032	0.71	+0.1
2,102,211	-	wbbK	b2032	0.71	+0.4
2,102,242	-	wbbK	b2032	0.74	+0.8
2,102,242	-	wbbK	b2032	0.74	+0.0
2,102,253	-	wbbK	b2032	0.75	+1.2
2,102,280	-	wbbK	b2032	0.77	-0.5
2,102,350	-	wbbK	b2032	0.84	+0.8
2,102,351	-	wbbK	b2032	0.84	-1.9
2,102,358	-	wbbK	b2032	0.84	+0.5
2,102,406	-	wbbK	b2032	0.89	+1.0
2,102,414	-	wbbK	b2032	0.89	+1.8
2,102,418	-	wbbK	b2032	0.90	+1.2
2,102,500	-				+0.9
2,102,587	-	wbbJ	b2033	0.12	-2.3
2,102,589	-	wbbJ	b2033	0.12	-3.5
2,102,640	-	wbbJ	b2033	0.21	-0.9
2,102,686	-	wbbJ	b2033	0.28	+0.1
2,102,694	-	wbbJ	b2033	0.30	+0.4
2,102,702	-	wbbJ	b2033	0.31	+0.3
2,102,769	-	wbbJ	b2033	0.42	-0.3
2,102,769	-	wbbJ	b2033	0.42	+0.0
2,102,783	-	wbbJ	b2033	0.45	+0.7
2,102,828	-	wbbJ	b2033	0.52	-0.6
2,102,828	-	wbbJ	b2033	0.52	+1.1
2,102,833	-	wbbJ	b2033	0.53	-1.8
2,102,848	-	wbbJ	b2033	0.56	-2.0
2,102,848	-	wbbJ	b2033	0.56	+0.1
2,102,848	-	wbbJ	b2033	0.56	-0.9
2,102,848	-	wbbJ	b2033	0.56	-0.4
2,102,848	-	wbbJ	b2033	0.56	+0.7
2,102,848	-	wbbJ	b2033	0.56	+0.1
2,102,848	-	wbbJ	b2033	0.56	+0.2
2,102,871	-	wbbJ	b2033	0.60	+0.0
2,102,876	-	wbbJ	b2033	0.61	-0.2
2,102,933	-	wbbJ	b2033	0.70	-2.9
2,102,939	-	wbbJ	b2033	0.71	+2.2
2,102,939	-	wbbJ	b2033	0.71	+0.0
2,102,939	-	wbbJ	b2033	0.71	-2.3
2,102,996	-	wbbJ	b2033	0.81	+0.7
2,103,057	-				+0.5
2,103,059	-				+0.2
2,103,116	-				-0.8
2,103,126	-				+0.9
2,103,126	-				+0.1
2,103,126	-				-0.7
2,103,137	-				+0.3
2,103,215	-	wbbI	b2034	0.13	+0.7
2,103,215	-	wbbI	b2034	0.13	-0.9
2,103,215	-	wbbI	b2034	0.13	-3.2
2,103,215	-	wbbI	b2034	0.13	+0.4
2,103,242	-	wbbI	b2034	0.15	+0.0
2,103,251	-	wbbI	b2034	0.16	+1.3
2,103,251	-	wbbI	b2034	0.16	+1.4
2,103,252	-	wbbI	b2034	0.16	-0.4
2,103,349	-	wbbI	b2034	0.26	-2.9
2,103,362	-	wbbI	b2034	0.27	-0.4
2,103,382	-	wbbI	b2034	0.30	+1.1
2,103,382	-	wbbI	b2034	0.30	+0.2
2,103,392	-	wbbI	b2034	0.31	+1.0
2,103,393	-	wbbI	b2034	0.31	+1.6
2,103,436	-	wbbI	b2034	0.35	+0.1
2,103,436	-	wbbI	b2034	0.35	+1.2
2,103,449	-	wbbI	b2034	0.36	-2.1
2,103,490	-	wbbI	b2034	0.40	-1.7
2,103,490	-	wbbI	b2034	0.40	-0.0
2,103,592	-	wbbI	b2034	0.51	-0.6
2,103,599	-	wbbI	b2034	0.51	+1.6
2,103,603	-	wbbI	b2034	0.52	+1.4
2,103,613	-	wbbI	b2034	0.53	-2.6
2,103,613	-	wbbI	b2034	0.53	+1.8
2,103,623	-	wbbI	b2034	0.54	-0.8
2,103,625	-	wbbI	b2034	0.54	+0.5
2,103,628	-	wbbI	b2034	0.54	+0.7
2,103,635	-	wbbI	b2034	0.55	-0.5
2,103,635	-	wbbI	b2034	0.55	-0.0
2,103,640	-	wbbI	b2034	0.55	+0.5
2,103,689	-	wbbI	b2034	0.60	+0.3
2,103,717	-	wbbI	b2034	0.63	-0.3
2,103,733	-	wbbI	b2034	0.65	+0.6
2,103,741	-	wbbI	b2034	0.66	+0.8
2,103,741	-	wbbI	b2034	0.66	-1.8
2,103,742	-	wbbI	b2034	0.66	+2.5
2,103,742	-	wbbI	b2034	0.66	+0.7
2,103,754	-	wbbI	b2034	0.67	+0.3
2,103,754	-	wbbI	b2034	0.67	+0.8
2,103,759	-	wbbI	b2034	0.67	-0.7
2,103,764	-	wbbI	b2034	0.68	-0.9
2,103,768	-	wbbI	b2034	0.68	-0.1
2,103,770	-	wbbI	b2034	0.69	-0.5
2,103,770	-	wbbI	b2034	0.69	-0.0
2,103,777	-	wbbI	b2034	0.69	+0.3
2,103,777	-	wbbI	b2034	0.69	+0.3
2,103,813	-	wbbI	b2034	0.73	+0.0
2,103,933	-	wbbI	b2034	0.85	+0.1
2,103,933	-	wbbI	b2034	0.85	+2.0
2,103,952	-	wbbI	b2034	0.87	-2.3
2,103,953	-	wbbI	b2034	0.87	+0.1
2,103,953	-	wbbI	b2034	0.87	+0.8
2,103,962	-	wbbI	b2034	0.88	+2.5
2,103,962	-	wbbI	b2034	0.88	-0.2
2,103,962	-	wbbI	b2034	0.88	-0.7
2,103,962	-	wbbI	b2034	0.88	+0.2
2,103,962	-	wbbI	b2034	0.88	+0.9
2,103,962	-	wbbI	b2034	0.88	-0.9
2,103,962	-	wbbI	b2034	0.88	+0.8
2,103,963	-	wbbI	b2034	0.88	+0.4
2,103,975	-	wbbI	b2034	0.89	-0.3
2,104,000	-				-3.4
2,104,008	-				+1.1
2,104,008	-				+0.1
2,104,008	-				-0.1
2,104,008	-				+1.4
2,104,039	-				-0.1
2,104,039	-				+1.9
2,104,161	-				-1.4
2,104,161	-				-1.1
2,104,300	-	wbbH	b2035	0.19	-0.2
2,104,308	-	wbbH	b2035	0.19	+0.3
2,104,308	-	wbbH	b2035	0.19	+0.3
2,104,323	-	wbbH	b2035	0.20	+2.7
2,104,396	-	wbbH	b2035	0.27	-3.1
2,104,397	-	wbbH	b2035	0.27	+0.6
2,104,398	-	wbbH	b2035	0.27	+1.4
2,104,403	-	wbbH	b2035	0.27	-1.9
2,104,411	-	wbbH	b2035	0.28	-1.6
2,104,411	-	wbbH	b2035	0.28	+0.1
2,104,416	-	wbbH	b2035	0.28	-2.7
2,104,416	-	wbbH	b2035	0.28	+0.7
2,104,451	-	wbbH	b2035	0.31	-1.2
2,104,505	-	wbbH	b2035	0.36	+1.4
2,104,546	-	wbbH	b2035	0.40	+0.3
2,104,546	-	wbbH	b2035	0.40	-2.6
2,104,556	-	wbbH	b2035	0.40	-0.6
2,104,584	-	wbbH	b2035	0.43	-0.0
2,104,584	-	wbbH	b2035	0.43	-1.2
2,104,584	-	wbbH	b2035	0.43	+0.9
2,104,584	-	wbbH	b2035	0.43	-0.9
2,104,603	-	wbbH	b2035	0.44	+0.9
2,104,632	-	wbbH	b2035	0.47	-0.3
2,104,633	-	wbbH	b2035	0.47	-1.4
2,104,633	-	wbbH	b2035	0.47	+0.6
2,104,656	-	wbbH	b2035	0.49	-0.9
2,104,657	-	wbbH	b2035	0.49	+0.9
2,104,751	-	wbbH	b2035	0.57	-2.5
2,104,815	-	wbbH	b2035	0.63	+0.7
2,104,842	-	wbbH	b2035	0.65	+0.4
2,104,853	-	wbbH	b2035	0.66	-0.6
2,104,853	-	wbbH	b2035	0.66	+0.6
2,104,859	-	wbbH	b2035	0.66	-0.3
2,104,891	-	wbbH	b2035	0.69	-0.2
2,104,891	-	wbbH	b2035	0.69	-0.4
2,104,891	-	wbbH	b2035	0.69	-1.2
2,104,891	-	wbbH	b2035	0.69	+0.7
2,104,901	-	wbbH	b2035	0.70	+0.5
2,104,901	-	wbbH	b2035	0.70	-1.7
2,104,906	-	wbbH	b2035	0.70	+1.0
2,104,923	-	wbbH	b2035	0.72	-0.9
2,104,923	-	wbbH	b2035	0.72	-3.7
2,104,923	-	wbbH	b2035	0.72	+0.9
2,104,923	-	wbbH	b2035	0.72	+1.0
2,104,923	-	wbbH	b2035	0.72	-0.9
2,104,955	-	wbbH	b2035	0.75	-0.3
2,104,955	-	wbbH	b2035	0.75	+0.1
2,104,955	-	wbbH	b2035	0.75	-0.2
2,104,955	-	wbbH	b2035	0.75	+0.6
2,104,955	-	wbbH	b2035	0.75	+0.6
2,104,962	-	wbbH	b2035	0.75	+1.3
2,104,962	-	wbbH	b2035	0.75	+1.0
2,104,962	-	wbbH	b2035	0.75	-1.5
2,104,962	-	wbbH	b2035	0.75	+0.7
2,104,972	-	wbbH	b2035	0.76	+1.4
2,105,044	-	wbbH	b2035	0.82	+1.1
2,105,044	-	wbbH	b2035	0.82	-2.0
2,105,078	-	wbbH	b2035	0.85	-1.5