Strain Fitness in Escherichia coli BW25113 around b2901

Experiment: 3hr_MSC_rep2_lowinoculum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3hr_MSC_rep2_lowinoculum
3,040,731	+	yqfA	b2899	0.33	-1.8
3,040,766	+	yqfA	b2899	0.39	+1.2
3,040,780	+	yqfA	b2899	0.41	-0.7
3,040,811	+	yqfA	b2899	0.45	+0.4
3,040,894	+	yqfA	b2899	0.58	+0.3
3,040,959	-	yqfA	b2899	0.68	+1.2
3,040,959	-	yqfA	b2899	0.68	+0.9
3,040,961	-	yqfA	b2899	0.68	+0.5
3,040,984	+	yqfA	b2899	0.72	-0.7
3,040,984	+	yqfA	b2899	0.72	+1.1
3,041,039	+	yqfA	b2899	0.80	+0.3
3,041,066	-	yqfA	b2899	0.84	+0.6
3,041,186	+				+0.2
3,041,186	+				+0.7
3,041,250	-				-0.1
3,041,449	+	yqfB	b2900	0.37	-0.8
3,041,479	-	yqfB	b2900	0.46	-1.6
3,041,480	-	yqfB	b2900	0.47	-3.7
3,041,529	+	yqfB	b2900	0.62	+0.2
3,041,529	+	yqfB	b2900	0.62	+0.0
3,041,581	+	yqfB	b2900	0.79	+0.4
3,041,607	-	yqfB	b2900	0.88	+0.6
3,041,790	+				-1.8
3,041,798	+				+0.6
3,041,798	+				+1.7
3,041,907	-	bglA	b2901	0.15	+0.5
3,041,907	-	bglA	b2901	0.15	+0.5
3,041,907	-	bglA	b2901	0.15	-0.4
3,041,920	+	bglA	b2901	0.16	+1.3
3,041,920	+	bglA	b2901	0.16	+1.5
3,042,006	-	bglA	b2901	0.22	+0.8
3,042,053	+	bglA	b2901	0.26	+0.4
3,042,067	+	bglA	b2901	0.27	-0.2
3,042,067	+	bglA	b2901	0.27	+1.2
3,042,083	-	bglA	b2901	0.28	+0.5
3,042,087	-	bglA	b2901	0.28	-0.4
3,042,110	-	bglA	b2901	0.30	+1.3
3,042,132	+	bglA	b2901	0.31	+0.9
3,042,140	-	bglA	b2901	0.32	+0.9
3,042,251	-	bglA	b2901	0.39	+0.4
3,042,251	-	bglA	b2901	0.39	+0.0
3,042,253	+	bglA	b2901	0.40	+0.7
3,042,280	+	bglA	b2901	0.41	+0.5
3,042,280	+	bglA	b2901	0.41	+0.5
3,042,280	+	bglA	b2901	0.41	+0.8
3,042,288	-	bglA	b2901	0.42	+0.6
3,042,288	-	bglA	b2901	0.42	+0.9
3,042,288	-	bglA	b2901	0.42	+0.3
3,042,288	-	bglA	b2901	0.42	+0.6
3,042,288	-	bglA	b2901	0.42	-3.2
3,042,410	-	bglA	b2901	0.50	-0.0
3,042,429	-	bglA	b2901	0.52	-0.1
3,042,434	-	bglA	b2901	0.52	+0.2
3,042,434	-	bglA	b2901	0.52	+1.5
3,042,466	+	bglA	b2901	0.54	-0.3
3,042,466	+	bglA	b2901	0.54	+0.4
3,042,524	-	bglA	b2901	0.58	-0.7
3,042,524	-	bglA	b2901	0.58	+0.3
3,042,531	+	bglA	b2901	0.59	-0.3
3,042,586	+	bglA	b2901	0.63	-0.5
3,042,603	-	bglA	b2901	0.64	+0.5
3,042,707	-	bglA	b2901	0.71	-0.9
3,042,720	-	bglA	b2901	0.72	-3.8
3,042,760	-	bglA	b2901	0.75	-3.9
3,042,761	-	bglA	b2901	0.75	+0.3
3,042,784	-	bglA	b2901	0.76	-0.2
3,042,784	-	bglA	b2901	0.76	-0.7
3,042,793	-	bglA	b2901	0.77	+0.5
3,042,878	+	bglA	b2901	0.83	-0.1
3,043,041	+				+1.0
3,043,041	+				-0.1
3,043,049	-				-4.5
3,043,049	-				+0.8
3,043,088	+				-1.2
3,043,088	+				+0.2
3,043,148	-				+1.2
3,043,148	-				-0.8
3,043,148	-				+0.8
3,043,148	-				+0.2
3,043,185	-				+0.0
3,043,248	-				-0.4
3,043,275	+	ygfF	b2902	0.13	+0.6
3,043,295	-	ygfF	b2902	0.15	+0.5
3,043,423	+	ygfF	b2902	0.33	-3.0
3,043,423	+	ygfF	b2902	0.33	-4.1
3,043,610	-	ygfF	b2902	0.58	+0.5
3,043,610	-	ygfF	b2902	0.58	+0.6
3,043,632	+	ygfF	b2902	0.61	-0.2
3,043,638	-	ygfF	b2902	0.62	-1.9
3,043,658	+	ygfF	b2902	0.64	+0.7
3,043,809	-	ygfF	b2902	0.85	+0.5
3,043,836	-	ygfF	b2902	0.88	-0.6
3,043,903	+				+0.4
3,043,903	+				+0.2
3,043,911	-				+0.3
3,043,911	-				-0.2
3,044,077	-				-0.8